Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2206 ATGACTAAACTTAAATTGCTTCAACTCGCCGGTGTACAACCTAATAGAGAGTTCAAACATGCCATGGAGTTCAAGCATTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTTCTTTGAGACACACTCCCATAGACTGCTATCAACCAAATTTAATTTCCATTGAGTTAGAAAACAGCAAACTCAGAGTTCTGTGGAAGAGGTCCCCGTTGTTGAAGCAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTAGTACTCAAGGATTGTACAGAGTTGTCTTCGATTTCGTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGTTGTACAAACCTTTCTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCCTCCTCTCTGGGTGTTCAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAGTGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCGGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTTTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCGTCAGTTATACAAAAATGTTCATCAAATGTTTTCACTTATGCAAATTGGGGTCCACGGCTTCAGATAAAAGGAGATGTATCTTTGGATACTGACAATGTGTCAACTTGCAATGAATTGGTGATGCATATTTCTGAATCAAAATCTTCTTTGAATTCCCTTTTGACTCAAATGGGGGTGGACAATTCTTTTACAGAGATACTTCAAAAGACCATTTCACAGCAGATGCATGATCCAGATGCAGTTAGTGACATGATATACCAGTATGCCATTGCTCAAGATGAGTTTACAAAGAACGAGAACCTCATCATGGACGTCTCTGGAAACTTCCTAACCCGTGCAGAGGCTGCCGCAGCAGCACCTGGTTCTTGGATAGTTAACAACGGTAGCGACGTGAGAATGAGAGAATGCTATTGCCTTAGTCCATATATCATGGAATCTCTAGCAAGCAAATTTGAAGAGTTTTTGGCCGGCGAGTACTTCCATTTGAATTCCATTATTGGCGACAACCCATATTGGAAAGAAAACAATATAAGGGATCAAAACCTGCTTATGGGGGCCATTTTGTGGAAGCACCATTGGTGGTGTTATGCACTAGATAGGTCACAGAAGAAATTGTACGTGCTCGACTCAATACACTGTGAGCCACCAAACGAGGATAGCAGGAAGTTGGATAAGCTTGTGTCGTTAAGGTTGGAAGAGTTGCTTGAAGTAGTAGACCCAAAGTATAAAGTCTCCAACAAGGGATTCTCCATAGTATATGCAGACGTACCAAAGCAGAGCAACGGGAACAATGTAGAATTTTTCGCAGGGATATTGTAA 1494 0.3989 MTKLKLLQLAGVQPNREFKHAMEFKHSRYLRWMSWHGFSLRHTPIDCYQPNLISIELENSKLRVLWKRSPLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLVLKDCTELSSISYTIGTLKNILHINIEGCTNLSVLPRSIYKLTSLETLLLSGCSKIDKLEEDVEQMESLAVLKADNTAIAQVPGALARLRNLGHVSLCGYEGLACDVIPLIMFWLWTSPNNMLSSVIQKCSSNVFTYANWGPRLQIKGDVSLDTDNVSTCNELVMHISESKSSLNSLLTQMGVDNSFTEILQKTISQQMHDPDAVSDMIYQYAIAQDEFTKNENLIMDVSGNFLTRAEAAAAAPGSWIVNNGSDVRMRECYCLSPYIMESLASKFEEFLAGEYFHLNSIIGDNPYWKENNIRDQNLLMGAILWKHHWWCYALDRSQKKLYVLDSIHCEPPNEDSRKLDKLVSLRLEELLEVVDPKYKVSNKGFSIVYADVPKQSNGNNVEFFAGIL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2206 497 SUPERFAMILY L domain-like 3 211 - -
Amo12g2206 497 SUPERFAMILY Cysteine proteinases 318 488 IPR038765 -
Amo12g2206 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 301 IPR044974 GO:0006952
Amo12g2206 497 Gene3D Ribonuclease Inhibitor 1 298 IPR032675 -
Amo12g2206 497 Gene3D Adenoviral Proteinase; Chain A 299 494 - -
Amo12g2206 497 Coils Coil 157 177 - -
Amo12g2206 497 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2206 Amo-Chr12 101208494 101214690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2206 1 190 WRKY Transcription Factor Family AT4G12020 32.178 1.56e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2206 - - aip:107625711 971.844