Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2201 ATGAAGCTGAACATTATCGGAGGGATTGTTGAACATATAACTACTCTACTTGCTTCGGAAGACTTGTTCATCGCAAGCCATCCAGTGGGAGTACAATCTCGCACGGAACATTTGATTCAACAGTTTCATTCTAATAAACTAGAAGACGTCGTGTTAATGGGGATATGGGGGATGGGAGGAGTGGGTAAAACAACCATTGCGAAAAGTGTTTATAATCAAATTCCTCACGGTTTTGATAGGCCAATGTTCCTCCCAAACATTCGGGAGATGTGGGAGAATAACCAACAGGTTTTTCTGCAAGAACAGTTATTGAATGGTATTTGCAAAGCACAGATAAACATACAAAACATCGCATCAGGAGTAGCTTTATTAAGGGAAAAACTTCGCCTGAAAAAGGTATTTCTTGTACTTGATGATGTAAATAATATAGACCAGTTGAATGCCTTGTGTGGAAGTCCAGAATGGTTTGGTGCAGGGAGTATAATAATCATCACAACAAGAGATAGAGGTCTGCTTCGTATGATTGGAGTTGATTATGTGTACCAAGTGAAAGAAATGGATTACAATGAATCTCTTGAACTTTTTTGTTGGAATGCATTTGGGAAAGCAACTCCTTTAACAGAGTTTGCTAGACTTGCAGAAGATGTAGTTAAATATTGTGGGGGATTGCCATTGGCCCTTATAACAATTGGTTGTCAATTGTATGGAAAGATGAAAGACGAGTGGGAGAATGTATTAGGTGGACTCAAAAGGTTTCCCCATCCGGATGTACACCAAGTTTTGAAAATAAGCTTTGATGGCTTAAATGATGACAGAGAGAAAGAAATATTTCTTGACATAGCTAGCTTTTGTATTGGCATGGAAAGGGGGGAGGTACTGAAAACACTAAATTATGGTTTTGGAATTAGCGAACATGGAATTAGTTTCCTTGAAGAGCGGAGTCTTATAACATTTGATGAGAAAGATAGAGTTCGAATGCATCCTTTACTGCGAGACATTGGAAGAGAAATCGTTCGAGAGCAATCACAAACTGATGCTCAGCGAAGGAGGTACGATGTTTTTGTGAGCTTTCGAGGCAAGGACACTCGTCCAACGTTTACATCGCATCTCCATACATCTCTCCAAAATGCTGGAATTACTGCTTTCAAGGATGATGATGATGTTGATGGACTTCAAAGGGGAGAACGGATTTCAATCGCATTGTTAAAAGCAATTGGATTGTCTGCATGTTCTGTCATTGTTTTTTCAACCCACTATGCTGATTCAAAATGGTGCCTGCAAGAGCTTGAGAATATCATGGTATGCCATAGAACAAAAGGTCAAGTGGTTTACCCCATATTCTATGAAGTAGATCCCTCAGACGTACGTTATCAAAAGAAAGAGAGCGAGTTTGGGAAAGCTTTTGAAAGTCTTATAAGTCGGAGATCAGTGGAAGAAGATAAGGTGCAAAGTTGGAGAACAGATCTTCGTGAAGTTAGTAGCTTTTCAGGGACGACTGTGATCAACTCCAGGAACGAAAGTGAAGATATCAAAAGAATTGTCGAACACGTTACTCGTTTATTAGATAAGACAGAGTTGTTCGTTGCAGCGCATCCAGTGGGAGTAGAACCTCGTGTGCAAAAGTTGATTGAAGAATCAAACATTCAAAAGACAAAAGATGTTCTGATACTTGGGATAAAAGGCATGGGGGGCGTTGGTAAAACCACTATTGCCAAAGCCATCTATAACAAAATTCGTCGCGATTTTGATGGCAGGAGCTTCCTCCTGAACATTAGAGAAACATGGCAGCAAGATAATGGAAAGGTTCTCTTGCAACAGCAACTTCTTGAGGATATATTCATTGCAACAAGGATACACATAAGTAACATTGATTCAGGGAAGCAAATATTAAAGGAAAGGCTTGGTGCTAAAAGGGTACTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTCGTCCTGGGAGCGTAGTAATCATCACAACAAGACATGATGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGGGGCTGAATCCCTTGAACTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGATAAGTTTGTCAAGCTATCTACAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGGTCCCATTTGTTTAATATGGGAATAAAAGAATGGCAAAGTGCATTGGATACTCTGAAATTAATTCCCCATGATAAAGTCCAGAAGAAACTACAAATAAGTTTTGATGGTTTAAGTAAGAATTATGAAAAAGAAATATTCCTTGACATTGCATGCTTTTTTATTGGGATGGATCGAAATGATGTTGTGAAGATATTAAATGGTTGCGGACTCCATGCAGAAATTGGAATCAGCGCCCTTAAAGAGCGAAACCTTGTAACTGTTGATAACAATAATATGCTTGGAATGCATGACTTGTTAAGAGATATGGGAAGAGCAATAATTTGTGAGCAATCACCTGAACTTGAAGAGCGAAGTAGATTATGGTACGATGAGAAAGTGCTTGAACTATTAGAGAATCATGAGGGAACAGATTTAAAGGCTAAGGGATTGAGTTTGAAGTTGCCAATGACCAATTCCATTTGTTTGAGTAAAGAAGCATTTAAGAATATGACTAAACTTAAATTGCTTCAACTCGCCGGTGTACAACCTAATGGAGAGTTCAAACATGTTTCAAGATATCTTAGATGGATGAGTTGGCATGGATTTCCTTTGAGACACACTCCCATAGACTGCTATCAACCAAATATAATTTCCATTGAGTTAGAAAACAGCAAACTCAAAGTTCTGTGGAAGGAGTCCCGGTTGTTGAAACAGCTGAAGATTTTAAATCTTAGTCATTCACATGACTTGATCAAAACCCCAGATTTTTCATACCTACCTAATCTTGAGAAGTTACTAGTCAAGGATTGTACAGAATTGTCTTTGATTTCCTATACCATTGGAACTCTAAAAAACATCCTTCATATCAATATAGAAGGTTGTACAAACCTTTGTGTACTTCCAAGAAGCATATACAAGTTGACATCTCTTGAAACTCTCATCCTCTCTGGGTGTTTAAAGATTGATAAGTTAGAAGAAGATGTGGAACAAATGGAATCTTTGGCAATGCTAAAAGCTGATAACACTGCCATAGCACAAGTGCCCAGTGCGCTAGCAAGATTAAGAAACCTTGGACATGTTTCTGTGTGTGGCTATGAAGGATTGGCATGTGATGTGATTCCTTTAATTATGTTTTGGTTATGGACTTCACCAAATAATATGTTGTCTTCAGTTATGCAAAAATGTTCAAATGTTTTCACTTATGCAAATTGGCGTCCACGGCTTCAGATAAAAGGAGATGTATCTTTGAATACTGATAATGTGGCAAATTGCAATGAATTGGGGATGGATATTTCTGAACCAAAATTTTCTTTGAATTCCCTTTTGATTCAAATGGGGGTGGAAAACTCAACCACAGAGATACTTCAACAGACTATTTTACAGAACAATGAGCTTGGAGATTACCTGCTCCCTTATGACAACAATAATCCTGGTTTGTTAACATTCAGTGGTGAAGGTTCCTTTGTGACTTTTCAAGTCCTTCATATGGATGGGCGCAACTTGAAGTCCATGATGTTGCACATTGTTTACTATTCTACTTCTTCCACATTCGCTACAACAGGTCTGATTCTTGAAAATGTGCAAATCCTAAATCTCTCAAGGGACATGTCCAATGTATTTAAGGGAGATAAGTTAGCTTCATTCAAAGATGAGGACAGGGAAATCCTAATGTCAAGTCTAGAACCTGGTGACACCATGCGGATTGTTGTTGCTTTAGGATCTGGGTTCATTGTGAAGAAGACCATAGTTTATCTCATATATGACGATGAACCACCAATTGAGGAAAACTTGGAGCACTTCAATGATGATGAGGATGATACTGTTTGTTCTACTGGTGATGACGTTGTAGCTTTTGTAAATGAAGGCACTTTGGGTGTTGATGTCATTGCAGCAGATGATGATGAAGATGTTACTGTTTTTGGTGTTCATGATGCAGTAGCTGGTATGAATGAAATTGTTTCTGGTGTTGATGCTATGGCAGAAGATAAGGATGGTGTTACTGTTGCAAATGTTGATGATGATACGGTAGCCAATCTGGATAGAAATGCTTCTACTTCTGGTACTGATATCATGCCACCAATTACTAATGGTTTTGGTGCTAATTATGTAGTAGGAACTGATATAAATGAAAGTTCTTCAAGTGTTGATGATAATAATGATGATGATGTTGCTGCCATTGGAGATAAAAATGTAAGTGATAATCTCTATGTTGCTTCCGTGGTAAAAAGACAGCAAGTTGAAGACATTTCAACCACCAAGACATCCGAGTCAAAGTCGACAGGACTTATTCCCTTAGTTCAGGTCCCTCTTGATGCTAATACATCTTCTGAGCTTACATTAACCATGACTGGTTTCAGAAGAAGATGA 4551 0.3854 MKLNIIGGIVEHITTLLASEDLFIASHPVGVQSRTEHLIQQFHSNKLEDVVLMGIWGMGGVGKTTIAKSVYNQIPHGFDRPMFLPNIREMWENNQQVFLQEQLLNGICKAQINIQNIASGVALLREKLRLKKVFLVLDDVNNIDQLNALCGSPEWFGAGSIIIITTRDRGLLRMIGVDYVYQVKEMDYNESLELFCWNAFGKATPLTEFARLAEDVVKYCGGLPLALITIGCQLYGKMKDEWENVLGGLKRFPHPDVHQVLKISFDGLNDDREKEIFLDIASFCIGMERGEVLKTLNYGFGISEHGISFLEERSLITFDEKDRVRMHPLLRDIGREIVREQSQTDAQRRRYDVFVSFRGKDTRPTFTSHLHTSLQNAGITAFKDDDDVDGLQRGERISIALLKAIGLSACSVIVFSTHYADSKWCLQELENIMVCHRTKGQVVYPIFYEVDPSDVRYQKKESEFGKAFESLISRRSVEEDKVQSWRTDLREVSSFSGTTVINSRNESEDIKRIVEHVTRLLDKTELFVAAHPVGVEPRVQKLIEESNIQKTKDVLILGIKGMGGVGKTTIAKAIYNKIRRDFDGRSFLLNIRETWQQDNGKVLLQQQLLEDIFIATRIHISNIDSGKQILKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCRPGSVVIITTRHDDLLRVCKLTFNLEEMNGAESLELFSWHAFKQACPKDKFVKLSTDVVEYSNGLPLALEVLGSHLFNMGIKEWQSALDTLKLIPHDKVQKKLQISFDGLSKNYEKEIFLDIACFFIGMDRNDVVKILNGCGLHAEIGISALKERNLVTVDNNNMLGMHDLLRDMGRAIICEQSPELEERSRLWYDEKVLELLENHEGTDLKAKGLSLKLPMTNSICLSKEAFKNMTKLKLLQLAGVQPNGEFKHVSRYLRWMSWHGFPLRHTPIDCYQPNIISIELENSKLKVLWKESRLLKQLKILNLSHSHDLIKTPDFSYLPNLEKLLVKDCTELSLISYTIGTLKNILHINIEGCTNLCVLPRSIYKLTSLETLILSGCLKIDKLEEDVEQMESLAMLKADNTAIAQVPSALARLRNLGHVSVCGYEGLACDVIPLIMFWLWTSPNNMLSSVMQKCSNVFTYANWRPRLQIKGDVSLNTDNVANCNELGMDISEPKFSLNSLLIQMGVENSTTEILQQTILQNNELGDYLLPYDNNNPGLLTFSGEGSFVTFQVLHMDGRNLKSMMLHIVYYSTSSTFATTGLILENVQILNLSRDMSNVFKGDKLASFKDEDREILMSSLEPGDTMRIVVALGSGFIVKKTIVYLIYDDEPPIEENLEHFNDDEDDTVCSTGDDVVAFVNEGTLGVDVIAADDDEDVTVFGVHDAVAGMNEIVSGVDAMAEDKDGVTVANVDDDTVANLDRNASTSGTDIMPPITNGFGANYVVGTDINESSSSVDDNNDDDVAAIGDKNVSDNLYVASVVKRQQVEDISTTKTSESKSTGLIPLVQVPLDANTSSELTLTMTGFRRR* 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2201 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 784 IPR027417 -
Amo12g2201 1516 SUPERFAMILY L domain-like 880 1234 - -
Amo12g2201 1516 SMART AAA_5 49 187 IPR003593 -
Amo12g2201 1516 SMART AAA_5 553 689 IPR003593 -
Amo12g2201 1516 Gene3D Ribonuclease Inhibitor 794 1125 IPR032675 -
Amo12g2201 1516 Gene3D - 348 518 IPR035897 -
Amo12g2201 1516 SUPERFAMILY "Winged helix" DNA-binding domain 759 866 IPR036390 -
Amo12g2201 1516 PRINTS Disease resistance protein signature 556 571 - -
Amo12g2201 1516 PRINTS Disease resistance protein signature 962 978 - -
Amo12g2201 1516 PRINTS Disease resistance protein signature 633 647 - -
Amo12g2201 1516 PRINTS Disease resistance protein signature 724 738 - -
Amo12g2201 1516 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 280 IPR027417 -
Amo12g2201 1516 Pfam NB-ARC domain 35 252 IPR002182 GO:0043531
Amo12g2201 1516 Pfam NB-ARC domain 540 758 IPR002182 GO:0043531
Amo12g2201 1516 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 346 IPR044974 GO:0006952
Amo12g2201 1516 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 361 1314 IPR044974 GO:0006952
Amo12g2201 1516 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 6 346 - -
Amo12g2201 1516 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 361 1314 - -
Amo12g2201 1516 Pfam TIR domain 351 522 IPR000157 GO:0007165
Amo12g2201 1516 SUPERFAMILY "Winged helix" DNA-binding domain 256 343 IPR036390 -
Amo12g2201 1516 Coils Coil 1049 1069 - -
Amo12g2201 1516 Gene3D - 15 179 IPR027417 -
Amo12g2201 1516 Gene3D - 519 686 IPR027417 -
Amo12g2201 1516 SUPERFAMILY Toll/Interleukin receptor TIR domain 344 497 IPR035897 -
Amo12g2201 1516 Gene3D - 186 269 IPR042197 -
Amo12g2201 1516 Gene3D - 690 773 IPR042197 -
Amo12g2201 1516 ProSiteProfiles TIR domain profile. 349 521 IPR000157 GO:0007165
Amo12g2201 1516 SMART till_3 350 495 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2201 Amo-Chr12 101123112 101132525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2201 49 342 WRKY Transcription Factor Family AT4G12020 30.405 8.06e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2201 - - ahf:112727946 2596.23