Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2139 ATGTCGTTTTACATTGGTCGCGAGGCTTCAAAGCTATGGAAGAGAATTTGTGCAGAAACGATTACAGAAATCAACCTTCTTCTCGAGAATTGGAAGTACCTACTCGCTGGTCTTGTTTGTCAGTACATACATGGCTTGGCTGCTCGCGGAGTTCATTATTTACATAGGCCTGGCCCTACTCTACAAGATATTGGATTCATGATTCTTCCTGAGCTTGGACAAGACAAAGCTTATATCAGTGAAACTCTGTTTACCTTTATCTTTGTATCCTTCGTCTTGTGGACATTTCATCCTTTCATATTGAAGAGCAGAAAGATCTACACAGTCCTAATATGGTGCAGAGTTCTAGCATTCTTAGTTGCTTCTCAACTTCTTCGCATAGTCACATTTTATTCTACGCAGCTTCCTGGTCCAAACTACCATTGCCGTGAGGGTTCTAAACTTGCCACATTGCCTCGTCCAGATAGTGTTCTTGAAGTCCTCTTGATTAATTTTCCGCGTGGTGTGTTATATGGATGTGGGGATTTGATATTTTCATCACACATGATCTTCACTCTTGTATTCGTTCGTACGTATCAGAAATACGGCATTCGAAGGTCCATAAAGCAGGTAGCATGGTTACTTGCTATTGTTCAGAGTCTTTTGATAGTAGCATCTCGCAAACATTACACAGTCGACGTAGTCGTTGCATGGTACACTGTTAATTTGGTGGTATTTTTCGTTGACAAGAAACTGGCAGAATTGCCAGACCGGTCTATCGTGGCTGCAACCTTACTACCATTGAGCACGAAAGACAAAGATGGCAGGACCAAAGAGGAGAATCACAAGCTTTTGAATGGGAATTCTGGAGATCCTGCAGATAGGAGGCAAAGAACTCAAGTAAATGGCAAGATCATGGAAGATGTCAACACAATACACCATCCTGACTCTGCAATGAATGGTGCATAG 948 0.4209 MSFYIGREASKLWKRICAETITEINLLLENWKYLLAGLVCQYIHGLAARGVHYLHRPGPTLQDIGFMILPELGQDKAYISETLFTFIFVSFVLWTFHPFILKSRKIYTVLIWCRVLAFLVASQLLRIVTFYSTQLPGPNYHCREGSKLATLPRPDSVLEVLLINFPRGVLYGCGDLIFSSHMIFTLVFVRTYQKYGIRRSIKQVAWLLAIVQSLLIVASRKHYTVDVVVAWYTVNLVVFFVDKKLAELPDRSIVAATLLPLSTKDKDGRTKEENHKLLNGNSGDPADRRQRTQVNGKIMEDVNTIHHPDSAMNGA* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2139 315 MobiDBLite consensus disorder prediction 265 289 - -
Amo12g2139 315 PANTHER SPHINGOMYELIN SYNTHETASE 1 315 IPR045221 GO:0016780
Amo12g2139 315 PANTHER PLANT INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 1 315 - -
Amo12g2139 315 Pfam PAP2 superfamily C-terminal 172 240 IPR025749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2139 Amo-Chr12 99377694 99382431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2139 - K22697 gmx:100815011 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2139 12 99377694 99382431 Amo02g2523 02 79045315 79046441 hybridization