Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2129 GGATGCAAGAGGCCGCAATGTGAGATTAGAGGAACTCCAGCGAACATGAGTGGTTGTTCTTCACTACAGCCAAGCCCACAGGCATCAACGTTCCCAAGCCCTGTTCCTTCCTACCATGCTAGCCCAACTTCCTCATCATTCCCCAACCCCTCTCGCATTGATCGCAACCTTCAAAACCCCTCTTCATTCCTCCTACCATTCATTCATAACATCACCTCCATCCCCACAAACCTTCCTCCTCTTAGAATATCCAATAGTGCCCCTGTTACCCCTCCTCTTTCTTCCCCAACCTCTAGGGGTTCTAAAAGGAAGGCGGATTTTGAATCCCTCTCCAATGTTTCCTCTCTTAATTCGTTCCGCCATCCTCTCTTTTCAGTATCCGCCCCATCCAGTCCCTTCCGCCGCCACCAATTGGCTACTTCCACCATTCCTGAGTGTGATGAATCTGATGCTTCCACTGTGGACTCCGGTCGCTGGGTTAGTTTTCAGACAACGACGGCCTCGGCTGCTCCTCCATCGCCTACCTTTAACCTTGTGAAACCAGCAATGCAGCAGATCACTCCCCAGAGTTCCATGGATATGAATGAAGGCATGCAATGGGGCCAGACTGCAGAGAAAGGAAGACCATCGGATTTTGACTTTGAGAATGGTAGAGTGAAGCCATGGGAGGGTTGGCCTTGCCAATATCTTGACAATATCAACCATATTGACAATATTTGTCTTGATATCACTCCTTCTACCCTCGATTTTGGTAATCATTTTGGGCATCTTATTATACCTTTGCAGCACCAATATTTTGTGAGGCCATCGTGGCTTCAACAACAAAATTTGCAAAGACATCCAAACACAGTTAGGTAG 858 0.479 GCKRPQCEIRGTPANMSGCSSLQPSPQASTFPSPVPSYHASPTSSSFPNPSRIDRNLQNPSSFLLPFIHNITSIPTNLPPLRISNSAPVTPPLSSPTSRGSKRKADFESLSNVSSLNSFRHPLFSVSAPSSPFRRHQLATSTIPECDESDASTVDSGRWVSFQTTTASAAPPSPTFNLVKPAMQQITPQSSMDMNEGMQWGQTAEKGRPSDFDFENGRVKPWEGWPCQYLDNINHIDNICLDITPSTLDFGNHFGHLIIPLQHQYFVRPSWLQQQNLQRHPNTVR* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2129 285 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 56 IPR008540 -
Amo12g2129 285 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 225 IPR033264 GO:0003700|GO:0006351|GO:0009742
Amo12g2129 285 MobiDBLite consensus disorder prediction 82 106 - -
Amo12g2129 285 MobiDBLite consensus disorder prediction 13 55 - -
Amo12g2129 285 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 225 - -
Amo12g2129 285 MobiDBLite consensus disorder prediction 82 100 - -
Amo12g2129 285 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2129 Amo-Chr12 99087327 99089473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2129 1 224 BZR Transcription Factor Family AT1G75080 51.055 1.63e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo12g2129 BES1_N 2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2129 K14503 - pop:7478010 325.094