Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2118 ATGGCAGCAGAGCAAGAAGAGGGATTGAAGCTTTTGGGAGTCAGAGCAAGCCCATTTAGTCACAGAGTGCAGCTAGCTCTGAAGCTGAAGGGAGTCCAACATGAATACCTTCAAGAGAATCTTGAAAATAAGAGCCAGCTACTTCTCAAATACAACCCTATTTACAAGAAGGTGCCTGTATTGCTTCACAAGGAGAAGTCCATAATAGAGTCTCTTGTGATTATTGAATATATTGATGAGACTTGGGAAGGGTACAAGATCTTGCCTCAAGAACCTTACCAAAGAGCCTTGGCTCGGTTCTGGGCCATCTTTATCGCTGAAAAGTGCATGTATACTATATGGACAACCGCGTGGACCTTTGATGAGGAAAAACGTGAGAAGGGCACTGAAGAAGTGAGCGAGATTTTGAAGACTCTTGAGAATGAACTCAAAGACAAGTTGTTCTTTGGAGGAGATGCACTTGGGTTTGTGGACATTGTTGGTGTCTTCTTGGCTTTTTGGTTCCCTATMTTRCATCAAGTTWTGGGGTTGCCTCAATTGGTAGYCATTGAGAATTTTCCGAAGCTTTATGATTGGAGCCAAAGACTTCTTGACCTTAATGTTGTCAAAGAAACTCTGCCTCCTAAAGAAGATGTTTTTGCTGCCTTCAGTGCTAACCTCCAAAGGAGCAATAACGCTACAAAATAG 687 0.4236 MAAEQEEGLKLLGVRASPFSHRVQLALKLKGVQHEYLQENLENKSQLLLKYNPIYKKVPVLLHKEKSIIESLVIIEYIDETWEGYKILPQEPYQRALARFWAIFIAEKCMYTIWTTAWTFDEEKREKGTEEVSEILKTLENELKDKLFFGGDALGFVDIVGVFLAFWFPILHQVXGLPQLVXIENFPKLYDWSQRLLDLNVVKETLPPKEDVFAAFSANLQRSNNATK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2118 228 Gene3D Glutaredoxin 1 90 - -
Amo12g2118 228 CDD GST_N_Tau 9 82 - -
Amo12g2118 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 216 IPR010987 -
Amo12g2118 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 219 IPR045073 -
Amo12g2118 228 CDD GST_C_Tau 92 218 IPR045074 GO:0004364|GO:0006749
Amo12g2118 228 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Amo12g2118 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Amo12g2118 228 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Amo12g2118 228 Gene3D - 91 226 - -
Amo12g2118 228 SFLD Main.3: Omega- and Tau-like 5 225 IPR045073 -
Amo12g2118 228 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 7 219 - -
Amo12g2118 228 Pfam Glutathione S-transferase, C-terminal domain 104 197 IPR004046 -
Amo12g2118 228 Pfam Glutathione S-transferase, N-terminal domain 9 80 IPR004045 -
Amo12g2118 228 SFLD Glutathione Transferase (cytosolic) 5 225 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2118 Amo-Chr12 98746807 98748676 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2118 5 218 Glutathione S-transferase Gene Family AT3G09270 51.389 9.95e-73 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2118 K00799 - gmx:547578 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2118 12 98746807 98748676 Amo12g2118 12 98746807 98748676 ECH