Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2112 ATGGCTTCTTCTTCAGATAGTGAAGAAGTGAGGGTACTGGGAAAATGGGCAAGCCCATTCAGCAACAGAATAGACCTTGCTTTGAAGCTAAAGGGTGTTCCATACAAGTACTCAGAGGAGGATCTTGCTAACAAGAGTCTTGACTTACTCAACTATAACCCTGTTCACAAGAAGGTACCTGTTCTTGTTCACAATGGGAACTCCATAGCTGAGTCACTTGTTATTCTTGAATACATAGATGAGGTTTGGAACAACAACAATAACCACGCCTTTTTGCCACAAGATCCTTATCATAGAGCCTTGGCACGTTTTTGGTGTAAGACCCTTGATGACAAGATCTTGCCTGCCATATGGAATGCTTGTTGGAGCGACGAGAAAGGGCGCGAGAAAGCCGTTGAGGAAGCCTTGGAAGCTCTCAAGATACTGCAAGATGAACTGAAGGACAAGAAGTTCTTTGGAGGAGAGACCATAGGATTGGTTGACATAGCAGCAAATTTTATTGGCTACTGGGTTTCTATATTACAAGAAATTGCAGGATTAGAGTTATTGACCATTGAGAAATTTCCTAAGTTATATAAATGGAGTCAAGAGTATATCAATCACCCTGTGATCAAGGAAGGCCTGCCTCCAAGAGATGAATTGTTTGCATTTTTCAAAGCATCTGCTAAAAAGTAG 675 0.4163 MASSSDSEEVRVLGKWASPFSNRIDLALKLKGVPYKYSEEDLANKSLDLLNYNPVHKKVPVLVHNGNSIAESLVILEYIDEVWNNNNNHAFLPQDPYHRALARFWCKTLDDKILPAIWNACWSDEKGREKAVEEALEALKILQDELKDKKFFGGETIGLVDIAANFIGYWVSILQEIAGLELLTIEKFPKLYKWSQEYINHPVIKEGLPPRDELFAFFKASAKK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2112 224 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 6 221 - -
Amo12g2112 224 SUPERFAMILY GST C-terminal domain-like 81 222 IPR036282 -
Amo12g2112 224 Gene3D Glutaredoxin 3 93 - -
Amo12g2112 224 Pfam Glutathione S-transferase, N-terminal domain 10 81 IPR004045 -
Amo12g2112 224 CDD GST_C_Tau 96 220 IPR045074 GO:0004364|GO:0006749
Amo12g2112 224 Gene3D - 95 224 - -
Amo12g2112 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Amo12g2112 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 95 224 IPR010987 -
Amo12g2112 224 SUPERFAMILY Thioredoxin-like 10 113 IPR036249 -
Amo12g2112 224 CDD GST_N_Tau 10 83 - -
Amo12g2112 224 Pfam Glutathione S-transferase, C-terminal domain 114 202 IPR004046 -
Amo12g2112 224 SFLD Main.3: Omega- and Tau-like 7 223 IPR045073 -
Amo12g2112 224 SFLD Main (cytGST) 7 223 - -
Amo12g2112 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 221 IPR045073 -
Amo12g2112 224 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2112 Amo-Chr12 98646614 98648030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2112 5 220 Glutathione S-transferase Gene Family AT3G09270 57.604 5.36e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2112 K00799 - gmx:547582 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2112 12 98646614 98648030 Amo12g2112 12 98646614 98648030 ECH