Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2045 ATGGCTTCTAATAATCAAGTGCTGCTTCTTGCATTCACACTCACACTCACACTTTTCTTGCAGCTTCTACCATTTCAGATTGAAGGTATTGGTGCAAAAGTTGAAAACCTTCCTGGTTATGATGGACCCCTTCCCTTTCATCTTGAAACCGGGTATATTGGGTTGGGGGATTCAGATGATGACATGCAAGTTTTCTACTATTTTATAAAGTCAGAGAATGATCCTAAGAATGACCCTCTTTTGCTATGGCTCACTGGTGGCCCTGGTTGTTCTTCATTTTCCGGCCTCGTTTATCAAATAGGTCCAATGAAATTCAAAATTGAGGAATTTGATGGGAGCTTGCCTAAGCTCATCCCGAGGCCACAGTCATGGACAAAGGTGGCTAACATTATTTTTGTGGATTTGCCAATGGGAACTGGATTCTCTTACTCCAAAAATGTCCTTCCCCATCGAAGTGACTGGAAGTTTGTTCACCAAACCCATCGATTTATTAGAAAGTGGCTTGCTGAAAACCCGGAATTTCTTTCAAATAAGTTCTACATGGCAGCTGATTCGTACTCCGGCATTCCTGTTCCTCCTATTACTCAAGAGATCGCTGATGGAAATGAAAGAGGTCTCGAACCCCGGATAAATCTCCAGGGATATATACTAGGAAACCCACTAACATCAGGATTAGAAGAGAATGATCGGATCCCATATGTTCACGGAATGGGGCTTATTTCTGATGAACTCTACTGGTCCTTGAAAAAAACTTGTCTTGGCAACATTATAAATGTGGATTCTACAAACAAATTGTGTCTAAATGACTTGCAGTACTATCATGAGCTTCTTGAAAATATTGAGTTGTACAACATTTTGGAGATATATTGTGTTGATGAGAATATCAAAGGAACAAGACGGAACCCCAGGAGATCTCTGGCTCAGAAGATAAAGGCACCTTTGAGTTCTCCGGTCACAGTGCCGGATATGCGCTGCCAAATTTATGGTTTCTTCCTTGGTACGGAATGGATAAATGACCCTGCTGTCCGTAAGGCACTGCATATTCGCGAGGGAACTATAGGGAAATGGAACCGGTGCTATAGTGACGATTATGTATTTGACATCCGTAGCAGCGTTCCGTTTCATGCGAATCTAAGTGCAAAAGGCTACCCTTCCTTGATATACAGTGGGGATCACGATGCAGTAGTTCCTTTCTCGTCGACTCAACGATGGATAAGGTCTCTAAATTACTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACGAGGACTTACTCGAATCAAATGACATTTGCAACTATAAGAGGTGCAGGGCATACAGCTCCAGAGAACAAGCCGGACGAAGGTTTTGCCATGTTCGTTAGCTTATTCAAAGATTCAGATGCACATAAAATTTCTCCATCCTAA 1428 0.4216 MASNNQVLLLAFTLTLTLFLQLLPFQIEGIGAKVENLPGYDGPLPFHLETGYIGLGDSDDDMQVFYYFIKSENDPKNDPLLLWLTGGPGCSSFSGLVYQIGPMKFKIEEFDGSLPKLIPRPQSWTKVANIIFVDLPMGTGFSYSKNVLPHRSDWKFVHQTHRFIRKWLAENPEFLSNKFYMAADSYSGIPVPPITQEIADGNERGLEPRINLQGYILGNPLTSGLEENDRIPYVHGMGLISDELYWSLKKTCLGNIINVDSTNKLCLNDLQYYHELLENIELYNILEIYCVDENIKGTRRNPRRSLAQKIKAPLSSPVTVPDMRCQIYGFFLGTEWINDPAVRKALHIREGTIGKWNRCYSDDYVFDIRSSVPFHANLSAKGYPSLIYSGDHDAVVPFSSTQRWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNQMTFATIRGAGHTAPENKPDEGFAMFVSLFKDSDAHKISPS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2045 475 SUPERFAMILY alpha/beta-Hydrolases 34 465 IPR029058 -
Amo12g2045 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Amo12g2045 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Amo12g2045 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Amo12g2045 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Amo12g2045 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 457 IPR001563 GO:0004185|GO:0006508
Amo12g2045 475 Pfam Serine carboxypeptidase 38 464 IPR001563 GO:0004185|GO:0006508
Amo12g2045 475 Gene3D alpha/beta hydrolase 35 473 IPR029058 -
Amo12g2045 475 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 18 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2045 Amo-Chr12 96323235 96330092 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2045 336 460 Calmodulin-binding Proteins AT2G22960 64.286 9.12e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2045 K16296 - gmx:100780069 653.669