Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2039 ATGGTGGCTCCTTCTTCTCTGCGCACTTTTGAAGTACTGCTTCTTGTTCTCACAATTTTGCTGCAGATAGCATTTCATCAGATTGAAGCTGCTTCTGCAAAAGTTGAATACCTTCCTGGTTTTGATGGCCCACTCCCCTTTTATCTTGAAACTGGGTACGTGGGATTGGGGGAGACAGATGATGACTTGCAAGTATTTTACTATTTTATTAAGTCAGAAAATGATCCTAAAAATGATCCTCTTATGCTATGGCTAACTGGTGGTCCTGGTTGTTCTTCATTTTCTGGCCTTGCCTACCAAATTGGTCCAATAAAGTTTAAAATTGAAGAATACAATGGGAGCTTACCTAATTTGGTTTTGAGGCCACAGTCATGGACAAAGGTATCTAATATTATTTTTGTAGATTTGCCATTTGGAACAGGCTTCTCATATGCAAAAGATGTCATTTCCCATCGAAGTGATTGGAAACTTATTCACCACACCCATCAATTTATTAGGAAGTGGTTTATTGAACATCCGGAATTTCTTTCAAATAAATTTTATATGGGAGCTGATTCTTACTCTGGAATTCCTGCTCCAGCTATTGTTCAGGAAATTTCAAATGGAAATGATAAAGGTCTCCATCCCTGGATAAATCTACAGGGATATCTATTAGGAAACCCAGTTACCACAAAGAAAGAGTCAAATGATCAGATACCATATGTTCATGGAATGGGACTTATTTCCGATGAACTCTATTTGTCACTGCAGAGAAATTGCAAAGGAGAGTATATGGATATAGATTCAGAAAATGAATTGTGTTTAAGAGACATGAAGTATTTTCAAAAGTGTCTTTCGAGAATTAATATGTTCGACATTTTGGATATCTATTGCGAAGATGATTCTCTTAAGAACAATGAAGCGATGCAAAGGAGATTTTTGACTGAAATGCCTGAGGCCTCTCTTAGTTCTTATCTAACAGTGCCAGCAATGAGCTGCCAAATTTATGGTTTCTTCCTCGGCACTCAATGGGCGAATGATGCAAGTGTTCGCAAGGCACTGCATGTTAGAGGGGAAATAGGGAAATGGGAACGGTGTTACACTACTGATTTTGACCATGAAATCACTAGTAGCTTCGAATTTCATGTAAATCTCAGCGCAAAAGGCTATCGATCTTTGATATACAGTGGCGATCATGATGTAGAGGTTCCTTTCTCGTCGACTCAAGCGTGGATAAGGGCTCTAAACTACTCCATTGTAGATGATTGGAGGCCATGGCTTTTGAATGGTCAAGTTGCAGGATTCACAAGAACTTACGCAAATCAAATGACATTTGCAACAGTGAAAGGTGCAGGGCATACAGCTCCTGAGTACAAGCCTGATGAAGGTTTTGCCATGTTCTCTAGGTGGCTCTCTAATGTCCCTTTGTAG 1410 0.3943 MVAPSSLRTFEVLLLVLTILLQIAFHQIEAASAKVEYLPGFDGPLPFYLETGYVGLGETDDDLQVFYYFIKSENDPKNDPLMLWLTGGPGCSSFSGLAYQIGPIKFKIEEYNGSLPNLVLRPQSWTKVSNIIFVDLPFGTGFSYAKDVISHRSDWKLIHHTHQFIRKWFIEHPEFLSNKFYMGADSYSGIPAPAIVQEISNGNDKGLHPWINLQGYLLGNPVTTKKESNDQIPYVHGMGLISDELYLSLQRNCKGEYMDIDSENELCLRDMKYFQKCLSRINMFDILDIYCEDDSLKNNEAMQRRFLTEMPEASLSSYLTVPAMSCQIYGFFLGTQWANDASVRKALHVRGEIGKWERCYTTDFDHEITSSFEFHVNLSAKGYRSLIYSGDHDVEVPFSSTQAWIRALNYSIVDDWRPWLLNGQVAGFTRTYANQMTFATVKGAGHTAPEYKPDEGFAMFSRWLSNVPL* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2039 469 Gene3D alpha/beta hydrolase 28 302 IPR029058 -
Amo12g2039 469 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 20 467 - -
Amo12g2039 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 467 IPR001563 GO:0004185|GO:0006508
Amo12g2039 469 Gene3D - 333 469 - -
Amo12g2039 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Amo12g2039 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Amo12g2039 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Amo12g2039 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Amo12g2039 469 Pfam Serine carboxypeptidase 39 466 IPR001563 GO:0004185|GO:0006508
Amo12g2039 469 SUPERFAMILY alpha/beta-Hydrolases 35 468 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2039 Amo-Chr12 96124825 96137052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2039 26 58 Calmodulin-binding Proteins AT2G22960 57.576 9.79e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2039 K16296 - gmx:100780069 749.584