Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2005 ATGGTGCAATGGTTGAATCCTATTTGTTGCATAGGATCCTTTACTAGAGAGAGTTGGCATAATTATTGTGAGTTTTCGAAACTGCTCCTTCTTTTTCTTTTTTTGTTCTCTCTTTCTTTCCGTCAATCTCTTGCGAGCTCCACTATGTCCCAAGGGATAGGTAGCCAGGCATCGGCTTCATCCCCTCATCGGAGAACCACCGGTCCTGTAAGGCGAGCAAATGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGAAATGCTGTTGCAGCCTTTAAGGGAAAGAGTTGGAAAAAAATAGCCGAGTTTTTCCCTGATAGATCAGATGTTCAATGTCTGCACAGATGGCAAAAAGTTCTTAGTCCAGAACTTGTTAAAGCACCTTGGACTAGGGAGTGA 399 0.4386 MVQWLNPICCIGSFTRESWHNYCEFSKLLLLFLFLFSLSFRQSLASSTMSQGIGSQASASSPHRRTTGPVRRANGGWTAEEDETLRNAVAAFKGKSWKKIAEFFPDRSDVQCLHRWQKVLSPELVKAPWTRE* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2005 132 MobiDBLite consensus disorder prediction 53 77 - -
Amo12g2005 132 CDD SANT 77 120 IPR001005 -
Amo12g2005 132 Gene3D - 73 126 - -
Amo12g2005 132 MobiDBLite consensus disorder prediction 53 67 - -
Amo12g2005 132 Pfam Myb-like DNA-binding domain 75 120 IPR001005 -
Amo12g2005 132 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 124 IPR017930 -
Amo12g2005 132 ProSiteProfiles Myb-like domain profile. 69 120 IPR001005 -
Amo12g2005 132 PANTHER MYB-RELATED PROTEIN B-LIKE 35 132 - -
Amo12g2005 132 PANTHER MYB PROTEIN-RELATED 35 132 - -
Amo12g2005 132 SUPERFAMILY Homeodomain-like 71 132 IPR009057 -
Amo12g2005 132 SMART sant 73 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2005 Amo-Chr12 94748553 94750477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2005 43 132 MYB Transcription Factor Family AT3G09370 65.591 3.31e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo12g2005 Myb_DNA-binding 6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2005 K09422 - ahf:112729345 165.236