Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1967 ATGCAAATATTAAAGGAAAGGCTTGGTGCTAAGAGGGTACTCATTGTGCTTGACGATGTGACTGATTTGGACCAACTCAATGCTTTGTGTGGTAGTGGTGAATGGTGTCGTCCTGGGAGCGTAGTAATCATCACAACAAGACATGGTGATCTTCTTCGAGTGTGTAAACTCACATTCAATCTAGAAGAGATGAATGAGGCTGAATCCCTTGAGCTTTTTAGCTGGCATGCATTCAAACAAGCATGTCCAAAAGAAGAGTTTGTCAAGCTATCTACAGATGTAGTTGAATATTCTAATGGATTGCCACTGGCTCTGGAAGTTCTTGGATCCCATTTGTTTAATATGGGAATAAAAGAATGGGAAAGTGCATTGGATACTCTGAAATCAATTCCCCATGATAAAATTCCACTGATGGGAGCAGAATTTTGGGACTTGGAGATTGGAGATTACTTGGAGATGTTTGATACTGTTTTCAGCAGGCCATGTAATTGCAGTGGAAGTGAGGGAGAACCATCAAGTAGTGCTGCACAGGCAACCATTCAAGGACACACTGTACTTGAAGCTCTATGA 570 0.4158 MQILKERLGAKRVLIVLDDVTDLDQLNALCGSGEWCRPGSVVIITTRHGDLLRVCKLTFNLEEMNEAESLELFSWHAFKQACPKEEFVKLSTDVVEYSNGLPLALEVLGSHLFNMGIKEWESALDTLKSIPHDKIPLMGAEFWDLEIGDYLEMFDTVFSRPCNCSGSEGEPSSSAAQATIQGHTVLEAL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1967 189 Gene3D - 1 61 IPR027417 -
Amo12g1967 189 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 135 - -
Amo12g1967 189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 135 IPR027417 -
Amo12g1967 189 Gene3D - 63 142 IPR042197 -
Amo12g1967 189 Pfam NB-ARC domain 4 129 IPR002182 GO:0043531
Amo12g1967 189 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 135 IPR044974 GO:0006952
Amo12g1967 189 PRINTS Disease resistance protein signature 7 21 - -
Amo12g1967 189 PRINTS Disease resistance protein signature 98 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1967 Amo-Chr12 93601714 93602691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1967 1 131 WRKY Transcription Factor Family AT5G45050 36.029 8.10e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1967 - - ahf:112727946 253.447