Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1964 ATGAGAGAAGGGGCTAACGAGGAGGAGAAGAGGATGATGAATATCAAGAAAACAAAAATAGACTGTTTTATTCAAAATAAACAGTTTGATTTCAACGATGATGAACTTGAAGTTGTTGATATTCTCTTTAACCTCCCCGGGAACTTCTTAGAGAGAGTTAATTTAGAGACTTCAAGCAGTGCTGCAAATTCAAGCCCCAGTGCTGACCAAGAACAGGTTTCAAAGGTGTCTTCCAAGAAACCAGTCAACCAAGAAAGAAACAGCCCCAGTGCCGATCAAGAACGGGTTTCGAACAAGAATTCCAAGAAGACCGTTAGCTCAGTGGATTCTCGGTCCAAGAAAGAATCAAAGAAACCAGTCAACCAAAACCAAGAACCCTCTGAATTGCCACAAAATTTCAAGAACTTGATCAGTGATATGGGTGGCAGCAGGATCACTCTACTTATCGAAAAAACTCTCTATAACTCGGATTTGAATCCGCAACAAAACCGGCTTTCAATACCGTCACAGCAGGTCAAGGACAAAGATTTCTTGCTTCCCACGGAACTAGAAATTCTGGAGGAGAAAAAGGGAATAAAAATGAAATTGATCCAACCCTCGCTGGAAATTACCGAGTTGACTTTGATTAAGTGGTTCATGCACAAGGGACCAAAGTCAGAGAAAGTAAGCATTTCCTACATTTTGAGATCAAATTGGGTCAAAGTTGCAAAGGCTAACAATCTAGGAGAGGGTGATGTTGTTCAAGTTTGGTCATTCCGAGTTGAAGAGAAATTATGCATGGCAATTGTCAAGCTTTGA 798 0.4073 MREGANEEEKRMMNIKKTKIDCFIQNKQFDFNDDELEVVDILFNLPGNFLERVNLETSSSAANSSPSADQEQVSKVSSKKPVNQERNSPSADQERVSNKNSKKTVSSVDSRSKKESKKPVNQNQEPSELPQNFKNLISDMGGSRITLLIEKTLYNSDLNPQQNRLSIPSQQVKDKDFLLPTELEILEEKKGIKMKLIQPSLEITELTLIKWFMHKGPKSEKVSISYILRSNWVKVAKANNLGEGDVVQVWSFRVEEKLCMAIVKL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1964 265 Pfam B3 domain-containing protein At2g31720-like 133 237 IPR005508 GO:0003677
Amo12g1964 265 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 8 265 - -
Amo12g1964 265 SUPERFAMILY DNA-binding pseudobarrel domain 147 261 IPR015300 -
Amo12g1964 265 MobiDBLite consensus disorder prediction 106 121 - -
Amo12g1964 265 MobiDBLite consensus disorder prediction 59 105 - -
Amo12g1964 265 Gene3D - 145 265 IPR015300 -
Amo12g1964 265 CDD B3_DNA 148 264 IPR003340 GO:0003677
Amo12g1964 265 MobiDBLite consensus disorder prediction 59 135 - -
Amo12g1964 265 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 8 265 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1964 Amo-Chr12 93593129 93593926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1964 128 262 B3 DNA Binding Superfamily AT1G05930 28.873 5.97e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1964 - - aip:110269262 430.254