Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1963 ATGTTAGATATCACTTCGTGCGTGATGATTGTGGAGAGTGTAGGAGATGGTGTATCAAATCTCAAGCCTGGTGATCATGTTCTTCCACTGTTCACTGGAGAGTGTGGGGAATGCCCACACTGCAAGAGTGAAGATAGCAACATGTGTGAGGTGTTGCGAATAAACCCAACAAGAGAGGGTATGATAAGTGACGGAAAATCAAGGTTCTCTACTATAAAAGGCAAGGAACCTATAAGTCACTTCCTTGGCACATCCACTTTTAGCCAATACACAGTTGTTCATTCAGGAAGTGTTGTTAAGATCAATCCCACACTTCCTTTGGACAAAGCTTGTCTCCTCAGTTGTGGCATCTCAACAGGAATAGGATCAATTCTCAATGTTGCCAAACCAAAGAAGGGGGCTTCAATAGCAATATTTGGGCTTGGAACTGTTGGACTGGCTGCAGCCGAAGGTGCAAAAATTGCTGGAGCATCCAGGATAATTGGAATTGACAAGAATCCCAACAAACTTGAGTATGCCATGAAATTTGGACTAACAGACTTCGTAAATCCAGAAGAACATGAAAGACCAGTTCATGAGGTCCTCAAAGAGATGACAAATGGTGGAGTTGATAGGTGCATAGAATGCACTGGAAACATTAATGCCTTAATGTCTGCAATGGAAGCTCTCCATGATGGATGGGGTGTTGCTGTACTTGTCGGAGTGCCTAGTGGTGATGCAGTTTTCAAGACTAATCCCTTCAATTTTCTTAATGAAAAGACAATTACAGGCACAACCTTTGGGAACTACAAGCCTAAGACTGGCCTACCAACACTAGTTGATATGTTCATGAACAACAAATTGGAGCTGGGCAAGTTTATAACTCATAGAGTTCCTCTTTCTGAAATCAATAAAGCCTTTGATTACATGATCAAAGGACAAGGTCTAAGGACAATCATAGACATGAACGACTAG 954 0.4203 MLDITSCVMIVESVGDGVSNLKPGDHVLPLFTGECGECPHCKSEDSNMCEVLRINPTREGMISDGKSRFSTIKGKEPISHFLGTSTFSQYTVVHSGSVVKINPTLPLDKACLLSCGISTGIGSILNVAKPKKGASIAIFGLGTVGLAAAEGAKIAGASRIIGIDKNPNKLEYAMKFGLTDFVNPEEHERPVHEVLKEMTNGGVDRCIECTGNINALMSAMEALHDGWGVAVLVGVPSGDAVFKTNPFNFLNEKTITGTTFGNYKPKTGLPTLVDMFMNNKLELGKFITHRVPLSEINKAFDYMIKGQGLRTIIDMND* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1963 317 Pfam Alcohol dehydrogenase GroES-like domain 10 101 IPR013154 -
Amo12g1963 317 SUPERFAMILY GroES-like 10 123 IPR011032 -
Amo12g1963 317 PANTHER ALCOHOL DEHYDROGENASE 9 315 - -
Amo12g1963 317 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 105 280 IPR036291 -
Amo12g1963 317 Pfam Zinc-binding dehydrogenase 144 263 IPR013149 -
Amo12g1963 317 Gene3D - 8 307 - -
Amo12g1963 317 Gene3D - 120 258 - -
Amo12g1963 317 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 9 315 - -
Amo12g1963 317 SUPERFAMILY GroES-like 266 313 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1963 Amo-Chr12 93572377 93576769 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1963 10 317 Monolignol Biosynthesis Gene Families AT1G72680 25.559 5.07e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1963 K18857 - ming:122089443 465.692