Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1950 ATGGCTTCTTCAAGCATGGAAGGATCAATGCCCACCATGGACGAATATGAGGCTCTCTTGTCAACCACCGACGTCGAACTTCTCAAGAGAGCATGGCGTAGCGAGAAGGCTGCTCCCGAGATTCTCCGCTACGATTTCGATCTCGTTGGCCGCGTCACCGAACAGCTTCAATTGATGGAAGAAACTGTGGATGAGAAATCTACCAGTGGTGCTGACCCGCTTTCGTTGTCTTTATATCAGATGGACTTGGATAGGACCCTCTTTCTCTTGAGATCATATCTTCGGATCCGCATACAGAAGATTGAAAAATACATGTTCCACATTCGAAAAAGTGACGAGCTATGGAATAGGTTATCTAAAGGGGAGAAAGATTTCGCTTCAAGGAAAGGCTCTCTTTTAATCCACATACATATGCTTACTGATACCATGCTTGAGAGTGTGCTTTCAAAATTGCCTGAAAATTATCAATCCGTTGAGAAGCAATCTGTAATAAGTGAAGAGGATGACATGGTCCCAGAACCACACCTAGACACATTCGTCTTATGCAGAAGCAAAGAGTATCTCTCTGGCATTCAACTTGAAGATGGACCTGTTGATGACAGGTCGAAGCTCTTTGAGATGGAGCCGGGTGTCCTTTACTTCATATGTTACAAATCAATAAAGCCACTTGTGGAGAGTGGGAAAATTGATCTTCTCTGA 699 0.4406 MASSSMEGSMPTMDEYEALLSTTDVELLKRAWRSEKAAPEILRYDFDLVGRVTEQLQLMEETVDEKSTSGADPLSLSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIRKSDELWNRLSKGEKDFASRKGSLLIHIHMLTDTMLESVLSKLPENYQSVEKQSVISEEDDMVPEPHLDTFVLCRSKEYLSGIQLEDGPVDDRSKLFEMEPGVLYFICYKSIKPLVESGKIDLL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1950 232 Pfam DNA replication complex GINS protein SLD5 C-terminus 174 232 IPR031633 -
Amo12g1950 232 PANTHER SLD5 PROTEIN 9 232 IPR008591 GO:0006261
Amo12g1950 232 SUPERFAMILY PriA/YqbF domain 176 232 - -
Amo12g1950 232 Gene3D - 12 222 - -
Amo12g1950 232 SUPERFAMILY GINS helical bundle-like 21 162 IPR036224 -
Amo12g1950 232 PIRSF GINS_Sld5 2 232 IPR008591 GO:0006261
Amo12g1950 232 CDD GINS_A_Sld5 24 148 IPR038749 -
Amo12g1950 232 Pfam GINS complex protein 58 122 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1950 1 179 Core DNA Replication Machinery Family AT5G49010 56.667 8.95e-57 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1950 K10735 - gmx:100784291 325.865