Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1949 ATGCCCACTCCTCTTGTCAGTGACGCTATCGTAGCCTTCTCTTCTCAACGACGTAGCCACTCCCTCCTCTCATCAGCTGAGTTCATAGCCTTGGAGAATGGAAGAGGAAGATGTAGTCTCCTATTTTCATGGTGCAACGGCTATGGCCGACAAAGATTTGTGTGTCAGAACAAAGAAGAACTGGTTTTCGATGACCCAAATGTTTTTCTAGGTGATGAACCTTCATCGGAGGTGGGTGAGGATGCGAATAAGGAGGGGTATTCTGGTGATAATATTGGTGATGATTTTTACGAAAATTGGAAAGACAGAGGCATTGACAGGATTGCTGACTTTGGCCGAGTCAACTTTAAAGAAATAACTTTTGATCAAATGAGATTGCTACATTTTCCCGATCGACATGTAGCTTTTGCTTTCGACAATTTATATGAACAAATGAATGGGTTTGCCACAAGGAAGGCCAGGCCAAGGCAAAATTCCAAGAAACAGGCGACACAACAGCAGTTTGTTTGCTTTAGGCAGGGGTTCAGAGAATTTGCTGCTGATAAGGAGGCCCATGAACAGTTTGAAGCCAGGTGGGAGAGATTGGTCACTGAGCTTCAGCTTCAGGATAATCAATGGGTCTGTGACCTTTATAACCAGAGGAAAATGTGGGACTCTGACAAAATCAATATGCAAGTGTTTGCATTCATTACTTGGATGGAATCCCTTGGAATACCACGCGATCACATTGTGTCCCTTCTTGTACATCTTGATTTCATGGAAATCCCAACGAGTCTTGTTTTGGAGAGGTGGTCTAAGAATGCTCGGTCGAAGGTGAGGCAATATGTTGAGAAGGGACTGTTTTGTTGGGACTCTATGGTAACTTGTCGCAATTGGATGCTGAACAACCTATGTAAGGAGATGTGTGTGCTTACTTCAGTGAGGGAAGATCAATTTGAAACGGTCATTGAGAAGGTATGCAACAAGATCACTCGATTAAAGCACGATACCAAAATTGGGCCTTTCTCACCTGCGGTTGTTGGCCAATCATCCACACTCGAGGGGTGCATTCAAGACCCACTTATTGTGTGTCGCAAGAAGAGGCCAAAGAAGGGCTCAATTAACCATACTTTGGGGCAGCAGCCTAGCCACGTGGATGACATCGATGAAGATAACAACTACACTCCTAACTTTAGGGAGGAAGTTGATGATGGAGTATCCTCATTACCAATCTCAACCCGTGGGGCAAGAGGAACACTTTTCTCCAGATGA 1251 0.4452 MPTPLVSDAIVAFSSQRRSHSLLSSAEFIALENGRGRCSLLFSWCNGYGRQRFVCQNKEELVFDDPNVFLGDEPSSEVGEDANKEGYSGDNIGDDFYENWKDRGIDRIADFGRVNFKEITFDQMRLLHFPDRHVAFAFDNLYEQMNGFATRKARPRQNSKKQATQQQFVCFRQGFREFAADKEAHEQFEARWERLVTELQLQDNQWVCDLYNQRKMWDSDKINMQVFAFITWMESLGIPRDHIVSLLVHLDFMEIPTSLVLERWSKNARSKVRQYVEKGLFCWDSMVTCRNWMLNNLCKEMCVLTSVREDQFETVIEKVCNKITRLKHDTKIGPFSPAVVGQSSTLEGCIQDPLIVCRKKRPKKGSINHTLGQQPSHVDDIDEDNNYTPNFREEVDDGVSSLPISTRGARGTLFSR* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1949 416 MobiDBLite consensus disorder prediction 376 391 - -
Amo12g1949 416 PANTHER - 171 218 - -
Amo12g1949 416 MobiDBLite consensus disorder prediction 366 416 - -
Amo12g1949 416 PANTHER - 234 345 - -
Amo12g1949 416 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 171 218 IPR031052 GO:0006355
Amo12g1949 416 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 234 345 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1949 Amo-Chr12 92660660 92663494 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g1949 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1949 - K17604 ahf:112785710 206.838