Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1920 ATGGATATTCTCATTTCAGTTGCTGCAAAAATAGCTGAGTACACTGTAGCACCTATTGGAAGGCAAGTTGGTTATCTAATTTTCTACAAAGCCAAATTTAAAGAGCTAAGGGACCGTGTCAGTGATCTTGAATACAAAAGAGACGAAATCAAGCAACGTGTTGAAGAAGAAAGAAGGAATGGGAAAACAACTTCTGATGTTGTGCAGAATTGGTTGAAGAATGTGGATGAAGCCATTGGAGACGTAACTCAACTTCAAAATGATCCTCGTCATGCAGAGGCTGGATGTTCTAGATGGTCATTTCCTAATGTGGTGACACGCCATCAACTCAGTAGAAAAGCTACAAAAGTTGCCAAAAAAGTTGTTGACGTACGGGGAGAAGGGGACTTTTCCCAGGTAGCTTACCGTCCCAAACTTGATGCAGTGTCAGCATTTACTACAAGGAGTAGTCAAAACTTGGAGTCAAGGAAACCAATTATGGAGAACATCATGCATGCTCTAAGAGACCCCAAAGTAAGCATGATTGGAGTCTACGGGCTTGGTGGTGTTGGTAAGACCACTCTCGTTGAAGAAGTTTATCAAATAGCTAAGGAAAACCAGTTGTTTGATGAGGTGGTTATGGCCACCATTTCCAAAACACCAGACATCAAAACCGTTCAAGAGGAGATTGCTGATCAGTTGGGTCTTCGTTTTGAAGAGGTAACTGTTGCTGGTAGAGTACCTCGTCTATGCCAGAGAATCCAAATGGAGAAAACTATCCTTCTCATATTGGATAATATTTGGGAAGCTCTTGACTTGAAAAAGATAGGGATTCCCTCTGAAGGTGAACACAATGGCTGCAAAATATTGATGACTTCTAGAAATTTAGATTTGCTACGACAAATGGGGGTCAAAGAGAATTTTAGACTAGAAGTTTTAAATGAAGAAGAATCATGGAGCTTGTTCAAAGCTCTGGCTGGTAATGTAGATGAAGAGTTTAGCTTGCATCAAATTGCACTCCAATTGGCAAAAAAGTGTGCAGGATTGCCTGTTCTCATAGTTACAATGGCTCGGTCATTGATAAATCAAGACATTCATGCGTGGAAAGATGCATTGAACCAATTAAAAAAGGTTGACAATGAAGAGTTGCAGGAGATAACCTATTCAGCTTTGGAGTTAAGTTACAAAAGGCTGAAAGGAAATGAAATGAAAGCCTTATTCTTGCTTTGTGCTACAGTTGCTGAAAATCCTTTGGTTTCTGACTTGTTCTATTATGGAATGGGTCTGGGCATATTCAACAACACAGATACATTGGAGGGTGCCAAGGACAGGCTTCACATAATGATTAGTGCATTAAAGGCATCTTGTTTGTTGATAGAAGATAACACTCAGACGAAGGTGAAAATGCACGATGTTGTTCGTGAAGTAGCTATCTCCATAGCTTCAAGGGATCATCACATGTTAATTAAACACTACGGTGAGTTAAAAGAGTGGCCAACAATAGATTTTCTTAGAAGGTGCTCTCAGATTATCTTGCACTGCTGTCAGATCCATACCATTCCTGAAAAGGTAGATTGCCCAAAACTTTCTATTTTTCAACTGGAAAGTAAGGATCGTTCTCTTGATATCCCTGATTGTTTTTTTGAGGGAATGAAAAGCCTCAAAGTTTTAGACTTAACAAGGTTAAACTTGGCTTCATTACCTACCTCTATTCGTTTATTAACTAGACTTACAACATTATGTTTGTATAATTGTGTTTTGGAAAATATGGATGCAATTGGTGCACTAAAAAGTTTAGAAATTCTTATCTTCCGCTATTCTTCAATGATCAAGTTACCAATTGAAATAGGGGAATTGAACAATCTAAGAATGCTCAATTTGAGTGATTCTGGGATTGAAGTCATCCCACCAAACATCATATCAAGCTTGATCAGATTAGAGGAGCTGTACATGGGCAATACATCCATTAAGTGGGAGATTATGAATTCTGATAATGAAGGAGAAAATGCCAGCCTTGATGAGCTTCGTCAATTGCCACAATTGAGAGCTCTAGAACTACAAGTTCAGGAAGCATGCATGTTGCCGAGGGACTTGATGTTCGATAACTTAGAAAGTTATAAAATAGTCATTGGAGATATCTGGGAATGGTCTGCAATTACAAATGTTTCAGTGAAAACGTTGAATCTCAAGCTTGGCACCAATATTCATTTGGAGTACAGCATCAAAGAACTTATAAAAAGATCAGAGATTTTGTATCTGGATGAAGTTGAAGGCATTTCGAATGTGCTCTTTCAATTAAACGGAGATGGATTTCAACAATTGAAACACTTCCACATCCAAAATAATGCCATAATTAAGCACATCGTTGATTTGAAAGAGAGGACTCATGTTCCAATCCCTTTTCCAAATCTGGAAAATCTAGTGATTCAGAATCTCAGTAAGATGGAGAAAATTTGTCATGGCCCACTTGCAGTTGGTTCCTTTGCCAAGCTCCAAACAGTCAAAGTTGAAAACTGTAATCAAGTGAAATACCTTTTCTCTGTTTCCATGGTTAAAAGGATGTCTCAACTTTCAGAGCTTCAAGTTTCTCAATGCGATCTTATGGAAATGGTAGTGTTTGGAGACGGTGATGCAAGTGCAATGAATGATGAAACTAATGAACCCATTGAGTTTGCCTCACTCCATTCTCTGACTCTACAGCATTTGCATGCACTTGCCAGCTTCTTCTCCCATGAGCCCACATCTTCTCATGTTTCCCTTTTTAATAATCAGGTTGCATTTTTTAATTTGGACACTCTCAAGTTGAGTTCACTCAAATTGAATAAAATTTGGAAGGATAATCAACATTCATTTTACAAATTGACAAATTTAATTGTTGAGAATTGTGATGGTCTAAAATATTTGTTCTCATCTACAATGGTGGAGAGTTTTCCCAACCTCACAAAGCTTGAAATAAGTGAATGTCATCTAATGGAGGAGATAATAGCTGCAGAAGAAGATAGTGACAACAATATTGTCACACTAGAAGAGGTTCGATTTTTCAAATTGCAAACAATTATCTTGAAGAATATGAAGAGCTTGAAGAAAATATGGCACAAAGAATTTTCTAAAGTAAAGACATTACAAGTCAAAAATTGTGAAAAAATTAGAGCAATTTTTTCTTCTTCAATGCAAAAAGCATATAATGATCTAGAGACATTAATGGTTACTGGCTGTGTTTCGGTAGAAGAGATATTTCAACTGAGTTCTGATGAAAATTATAGTACAGAACAAACACAGCTGAAAAAAATTACTCTAGAAAGATTGTCGAAGTTAAAACAAATATGGAGCAAGGATCCTGAAAGAGCTCTTAATTTTTGCAATCTAGAGGAAATAAATGTAGAGAGCTGCATAAACTTGGAATTTGTATTTCCATGTTCAGTAGCCACAAGTTGCTCACATCTTAAAGAACTTAGAATTAAATGGTGTCAAAACATGAAGGAAATTATTGGATTCAAGGAAGAACCCATGTTCTCATCTATTTCCTTTGAGTTTAACCATTTAAATACGTTGGTGCTTTGGTACTTGCATAAGCTCAAAGGGTTCTATGCACGAAATTACACATTATCATGTCCATCTTTGAGAAAATTAAATATTACTGGATGTGTGAAGTTAAATTTGTACAGAACTCTTTCTACAAGTAGTCATCAAAAGCTTTCAGATGAAGAATATATTATTTCAACACAGCAACATTTGATAGCTGAACAGGTAATGCCTAATTTAGAGCACTTGGTAATAGATGAAAAGGATGCTGTCAACATATTGCAAACCCAAAATATAGGTTCCTTCTTCAACAAAATATCATTTCTTGCTCTATCCCGTTACAAGACAGAAGGTTCTGCTTTTCCTGATCAGGTTCTGCAGAATATATACAGTTTGAAACGGCTAACTGTTGAGTGGAGTTCCTTTAAGAAGATATTTCAAGATAAAAGGCTTACAAATGAAAAAAATTGTACAAAGCTCCAAAGTTTGACACTCTATCAATTACCAAATCTTCAACATATATGCGAAGAAGGACTGCAAATTGACCCAGTTCTCGAGCTTCTTGAATGTTTATTTGTTGATGGATGTTCAAGTTTGATAAACATTGTTCCTTCTTCTGTTACCTTTTGCCATTTGACCTATCTTGAGGTAGCAAATTGCAATAGCATGATAAACTTACTTTCTCCTCGTACAGCAAGAAGTCTGGCCAAGCTCACCGTAATGAAGGTAAAACAATGTGATTCACTTGAGGAAATATTGTCCAAAGAGGGAGAGGAGATAACAAATGACATTGCATTTTTCTCCTTGGAAACTTTGGAGTTGGATTCTTTACCAAGTCTAGGTAGATTTTGTTCCCAAAAGTGCTTCTTAAGATTTCCATTGTTGGAGGATGTAGTAGTTAGGGAATGTGCTCGCATGAAGTATTTCTCTGAAGGAGACAGGGTGAGCACACCAAAGCTTCGAAAAGTGCTAACAGCAGAGAATAGTAAAGAATTTTATTGGAAGGGAGACTTGAATGGAACCATAAAAAACATGTTTGAAGACAAGTCAGGGAATTTGTTGCTTACATTTTTACATGAGTATATTGAAATCGCATAG 4599 0.3688 MDILISVAAKIAEYTVAPIGRQVGYLIFYKAKFKELRDRVSDLEYKRDEIKQRVEEERRNGKTTSDVVQNWLKNVDEAIGDVTQLQNDPRHAEAGCSRWSFPNVVTRHQLSRKATKVAKKVVDVRGEGDFSQVAYRPKLDAVSAFTTRSSQNLESRKPIMENIMHALRDPKVSMIGVYGLGGVGKTTLVEEVYQIAKENQLFDEVVMATISKTPDIKTVQEEIADQLGLRFEEVTVAGRVPRLCQRIQMEKTILLILDNIWEALDLKKIGIPSEGEHNGCKILMTSRNLDLLRQMGVKENFRLEVLNEEESWSLFKALAGNVDEEFSLHQIALQLAKKCAGLPVLIVTMARSLINQDIHAWKDALNQLKKVDNEELQEITYSALELSYKRLKGNEMKALFLLCATVAENPLVSDLFYYGMGLGIFNNTDTLEGAKDRLHIMISALKASCLLIEDNTQTKVKMHDVVREVAISIASRDHHMLIKHYGELKEWPTIDFLRRCSQIILHCCQIHTIPEKVDCPKLSIFQLESKDRSLDIPDCFFEGMKSLKVLDLTRLNLASLPTSIRLLTRLTTLCLYNCVLENMDAIGALKSLEILIFRYSSMIKLPIEIGELNNLRMLNLSDSGIEVIPPNIISSLIRLEELYMGNTSIKWEIMNSDNEGENASLDELRQLPQLRALELQVQEACMLPRDLMFDNLESYKIVIGDIWEWSAITNVSVKTLNLKLGTNIHLEYSIKELIKRSEILYLDEVEGISNVLFQLNGDGFQQLKHFHIQNNAIIKHIVDLKERTHVPIPFPNLENLVIQNLSKMEKICHGPLAVGSFAKLQTVKVENCNQVKYLFSVSMVKRMSQLSELQVSQCDLMEMVVFGDGDASAMNDETNEPIEFASLHSLTLQHLHALASFFSHEPTSSHVSLFNNQVAFFNLDTLKLSSLKLNKIWKDNQHSFYKLTNLIVENCDGLKYLFSSTMVESFPNLTKLEISECHLMEEIIAAEEDSDNNIVTLEEVRFFKLQTIILKNMKSLKKIWHKEFSKVKTLQVKNCEKIRAIFSSSMQKAYNDLETLMVTGCVSVEEIFQLSSDENYSTEQTQLKKITLERLSKLKQIWSKDPERALNFCNLEEINVESCINLEFVFPCSVATSCSHLKELRIKWCQNMKEIIGFKEEPMFSSISFEFNHLNTLVLWYLHKLKGFYARNYTLSCPSLRKLNITGCVKLNLYRTLSTSSHQKLSDEEYIISTQQHLIAEQVMPNLEHLVIDEKDAVNILQTQNIGSFFNKISFLALSRYKTEGSAFPDQVLQNIYSLKRLTVEWSSFKKIFQDKRLTNEKNCTKLQSLTLYQLPNLQHICEEGLQIDPVLELLECLFVDGCSSLINIVPSSVTFCHLTYLEVANCNSMINLLSPRTARSLAKLTVMKVKQCDSLEEILSKEGEEITNDIAFFSLETLELDSLPSLGRFCSQKCFLRFPLLEDVVVRECARMKYFSEGDRVSTPKLRKVLTAENSKEFYWKGDLNGTIKNMFEDKSGNLLLTFLHEYIEIA* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1920 1532 Gene3D Ribonuclease Inhibitor 600 866 IPR032675 -
Amo12g1920 1532 Gene3D Ribonuclease Inhibitor 874 1074 IPR032675 -
Amo12g1920 1532 SUPERFAMILY RNI-like 790 1211 - -
Amo12g1920 1532 PANTHER - 1112 1211 - -
Amo12g1920 1532 Coils Coil 68 88 - -
Amo12g1920 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 403 IPR027417 -
Amo12g1920 1532 Pfam NB-ARC domain 160 389 IPR002182 GO:0043531
Amo12g1920 1532 PANTHER - 992 1084 - -
Amo12g1920 1532 PANTHER - 1341 1508 - -
Amo12g1920 1532 PANTHER RPP4C3 23 993 - -
Amo12g1920 1532 Gene3D Ribonuclease Inhibitor 446 599 IPR032675 -
Amo12g1920 1532 PANTHER RPP4C3 1341 1508 - -
Amo12g1920 1532 PRINTS Disease resistance protein signature 542 558 - -
Amo12g1920 1532 PRINTS Disease resistance protein signature 174 189 - -
Amo12g1920 1532 PRINTS Disease resistance protein signature 339 353 - -
Amo12g1920 1532 PRINTS Disease resistance protein signature 247 261 - -
Amo12g1920 1532 PANTHER - 23 993 - -
Amo12g1920 1532 Gene3D - 141 303 IPR027417 -
Amo12g1920 1532 SUPERFAMILY RNI-like 1166 1420 - -
Amo12g1920 1532 Gene3D Ribonuclease Inhibitor 1077 1471 IPR032675 -
Amo12g1920 1532 SUPERFAMILY L domain-like 461 861 - -
Amo12g1920 1532 Gene3D - 305 392 IPR042197 -
Amo12g1920 1532 PANTHER RPP4C3 992 1084 - -
Amo12g1920 1532 PANTHER RPP4C3 1112 1211 - -
Amo12g1920 1532 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1920 Amo-Chr12 91784546 91792703 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1920 172 567 WRKY Transcription Factor Family AT5G45050 24.350 3.31e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1920 - - aip:107625541 2476.05