Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1888 ATGGGTAAGGTTTTTACTTTGGCTGACGTTTCTTCCCACAACCACCGCAAAGATTGCTGGCTCGTCATTCATGGCAAGGTTTATGATGTGACCAAGTTCTTAGAGGACCACCCTGGTGGGGATGAAGTCCTGTTGTCTTCCACAGGGAAAGATGCGTCTAATGATTTTGACGATATTGGTCACAGCACCAGCGCCGTGGCGATGATGGATGAGTTCTACATCGGAGAAATCGATTCATCAACCATTCCATCCAAGGTTAAGTACACTCCCCCAAAACAACCTCACTACAACCAGGACAAGACGCCACAGTTTGTCATCAAGCTTCTCCAGTTCCTACTCCCTCTGCTCATCTTGGGTTTGGCCGTCGGAATTCGCTTCTACACCAAATCATCATGA 396 0.4773 MGKVFTLADVSSHNHRKDCWLVIHGKVYDVTKFLEDHPGGDEVLLSSTGKDASNDFDDIGHSTSAVAMMDEFYIGEIDSSTIPSKVKYTPPKQPHYNQDKTPQFVIKLLQFLLPLLILGLAVGIRFYTKSS* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1888 131 Gene3D - 1 83 IPR036400 -
Amo12g1888 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 2 78 IPR001199 -
Amo12g1888 131 PANTHER - 2 129 - -
Amo12g1888 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 88 IPR036400 -
Amo12g1888 131 PRINTS Cytochrome B5 signature 27 37 IPR001199 -
Amo12g1888 131 PRINTS Cytochrome B5 signature 37 51 IPR001199 -
Amo12g1888 131 PRINTS Cytochrome B5 signature 52 59 IPR001199 -
Amo12g1888 131 PRINTS Cytochrome B5 signature 65 77 IPR001199 -
Amo12g1888 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 33 40 IPR018506 GO:0020037
Amo12g1888 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 6 77 IPR001199 -
Amo12g1888 131 SMART Cyt_b5_2 5 78 IPR001199 -
Amo12g1888 131 PANTHER CYTOCHROME B5 2 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1888 Amo-Chr12 89771527 89773844 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1888 3 129 NADPH P450 reductases AT5G53560 66.929 4.08e-65 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1888 K23490 - gmx:100500611 232.646