Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1884 ATGGCAGAAGCAGAAGCAGTCTATTTCCAGCATTCAAAGGACAGCAAGAATAGAACGGTTCAATACCCGGTGGAACATGCTGAGAAGTTTGAGAAATTTGGCATGTCGCCTTCCAAAGGTGTTCTTTTCTTTGGCCCTCCGGGCTGCGGCAAAATCCTGTTTACAAAAGCAATTGCAAATGAATTCCAGGCCAACTTCATAAGTGTCAGAGACCTGCATTGCTTCTGCAGTTGGCCTGGCATTCCAAAATCCACACGGTCCAAAATTCATAAATGGACCGAGTCATTTGTTGTCCTGGGAAAAAAAAAGTCTCAGCTAAAAAGGGTTGAAGGATCTTAG 339 0.4425 MAEAEAVYFQHSKDSKNRTVQYPVEHAEKFEKFGMSPSKGVLFFGPPGCGKILFTKAIANEFQANFISVRDLHCFCSWPGIPKSTRSKIHKWTESFVVLGKKKSQLKRVEGS* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1884 112 CDD AAA 37 69 - -
Amo12g1884 112 Gene3D - 11 77 IPR027417 -
Amo12g1884 112 Pfam ATPase family associated with various cellular activities (AAA) 41 77 IPR003959 GO:0005524|GO:0016887
Amo12g1884 112 PANTHER AAA-FAMILY ATPASE 13 89 - -
Amo12g1884 112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 70 IPR027417 -
Amo12g1884 112 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 13 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1884 Amo-Chr12 89716404 89718495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1884 13 91 Calmodulin-binding Proteins AT3G56690 37.500 1.69e-14 66.2