Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1869 GAAACTATAGTAGGTCAAAGCCAGTTTACCATCCCTATTTTACGAACGCCTTCGAATGAGGTACGAGTTGTGACCCTGTTTTGCTCCGACAACCTGAAGCTTTGGTTGTGTAAAATTACGTCTACATGCGAAGATGATGTTAAAAATGATTCTGGTAATGATTTGGGTGATGATTTCAATTATGAACCGAATTCACATGATGATGTTGAAGATGATGATGGTGATTCATTGGATGTTACTAGAAAAAGTGAACATGATTGTGATGTTAAAAGAATAGCAGATTTAATGGTAGAGGGCATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCCAATTTTATAATGACTATGCTTGTTGGCATGGCTTTGTAATGAGGAAGGATGACATCGTTAGAGATAAGGAAGGTAAAATAATTTGTAGGCAACTTGTTTGCAATAAAGAGGGGCGCAGAAATATGAGATATCTTGATTTGGAGAATCGATCAAGGGAGGCAAGGTCAATCATGCGAACTAAGTGCCCAGCACGACTTAAGGTTAAGGTTGACTACGGCTGTGGTAGACGGAAAGTATCATGTTTTGTGGAATCTCACAATCATGAATTGACGCCTCCCTCCCCCCTCCCCCCCCCCCAAATTTGTGCATCTCGCTCCAGCCAATTGTCGTCTTACTGTTACTAA 681 0.4112 ETIVGQSQFTIPILRTPSNEVRVVTLFCSDNLKLWLCKITSTCEDDVKNDSGNDLGDDFNYEPNSHDDVEDDDGDSLDVTRKSEHDCDVKRIADLMVEGIWNLEFRTEDEACQFYNDYACWHGFVMRKDDIVRDKEGKIICRQLVCNKEGRRNMRYLDLENRSREARSIMRTKCPARLKVKVDYGCGRRKVSCFVESHNHELTPPSPLPPPQICASRSSQLSSYCY* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1869 226 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 61 207 - -
Amo12g1869 226 MobiDBLite consensus disorder prediction 54 77 - -
Amo12g1869 226 Pfam FAR1 DNA-binding domain 113 203 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1869 Amo-Chr12 88985903 88986960 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g1869 FAR1 2.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1869 - - adu:107460934 278.1