Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1864 ATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTGCTCAATTCAGATGAACAATGATAGGAATTGCAATAATGGCAGTAATATTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTGGACTCATGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATATTTACCTTGGTGGTGATGCTAGTGCTAAGAATAGGGATATATTGAAACAGAATGGGATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCCCCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCAGAGGATATTAGTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAACAAGGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGAAAGTGGGCTGCTATGATGTTGATTATGAAGTTTTCCAAAAAGCTATTGTTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGCCTTAAGGCGTAAAGTTTCCTCTTCTCATATGAAGGAGATTGTCACAGCCCCTAAGTCATCCCTCCCAAGGATTCTATTTTTTCGCCCTCGTATATCTCACCTTGGAAGGAGGGTGAGAAGAGAGAGAGAGAATAATGGGAGTAAGGGAGTGAAAAAGGGAAGAAGACGCGAAAAGAGAGGAAGGAGGAGGTCGCCGGCGTTGATGGTGGCTGACGGAGGCACCGCTGTGCGGCGGTGA 846 0.4243 MRGNPGERLKLDLCSIQMNNDRNCNNGSNISGNNNSCNNNGVSGLMKRDRIAFFDKECSKVAEHIYLGGDASAKNRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDISSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMKVGCYDVDYEVFQKAIVGGFVPPFPSSEDEHETHLPARESSWSALRRKVSSSHMKEIVTAPKSSLPRILFFRPRISHLGRRVRRERENNGSKGVKKGRRREKRGRRRSPALMVADGGTAVRR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1864 281 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 160 227 - -
Amo12g1864 281 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 4 159 - -
Amo12g1864 281 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 167 IPR029021 -
Amo12g1864 281 Gene3D Protein tyrosine phosphatase superfamily 37 175 IPR029021 -
Amo12g1864 281 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 203 IPR020422 GO:0006470|GO:0008138
Amo12g1864 281 PANTHER MKPA PROTEIN 160 227 - -
Amo12g1864 281 PANTHER MKPA PROTEIN 4 159 - -
Amo12g1864 281 SMART dsp_5 57 193 IPR020422 GO:0006470|GO:0008138
Amo12g1864 281 ProSitePatterns Tyrosine specific protein phosphatases active site. 141 151 IPR016130 GO:0016311|GO:0016791
Amo12g1864 281 MobiDBLite consensus disorder prediction 240 281 - -
Amo12g1864 281 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 160 IPR000387 GO:0016311|GO:0016791
Amo12g1864 281 CDD DSP 58 160 - -
Amo12g1864 281 Pfam Dual specificity phosphatase, catalytic domain 65 167 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1864 Amo-Chr12 88596093 88597330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1864 6 93 Protein tyrosine phosphatase (PTP) family AT3G55270 57.303 2.06e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1864 - - aip:107627084 301.212