Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1844 ATGGCAGAATCGCAAGAAGAACGTGTTTCAAGCGAGGGTCCTCCTTTATGCACATCACCTAGCCGAAATTCATTAATGGAGGTAGATATAGCTGAACCGTTAGTTTGTGTAGCCTCTGACGTTTCAGAAAATTTATCATACGAACAAGAATACTTAGCTAGCGATGTCGCAGGCCACGGTCACAAGTCGAACAAGGCCACGCAGTTGTCGGATGTTACGGATGTTGGAAGTGAAGAGATGGAGCTTGGTGATGAGTTACCAGATCATGGTTTCCTACAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTGCTCAGTTACAGATGGCTCATGACTTTTATGTTACCTATGCAAAGAAAGCTGGATTTGCAACTAAGATAAGGACGACAACATTTGACAAGATCACAAAGGCTCCCGTTAACCAAGCTATACACTGTAATCGCGACGGGATCCGCGAGTCTCGTGTTAAAGCACCAACGCGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTAAAGTTTGATAAAGACGTGCAAGACTGGGTTTTGTTCAAGGTTGACTTGACGCACTCACACCCCTGTTCACCGAGAAAGGCAGTTCACTACCATGAGTATAGGAAGCTGACCATGCATGCGAAGTGCGTGATCGAGGATAACGATGAGGCTGGGATTTGA 687 0.4571 MAESQEERVSSEGPPLCTSPSRNSLMEVDIAEPLVCVASDVSENLSYEQEYLASDVAGHGHKSNKATQLSDVTDVGSEEMELGDELPDHGFLQEDEIPRVGMRFAQLQMAHDFYVTYAKKAGFATKIRTTTFDKITKAPVNQAIHCNRDGIRESRVKAPTRKNTISAAGCKARIYVKFDKDVQDWVLFKVDLTHSHPCSPRKAVHYHEYRKLTMHAKCVIEDNDEAGI* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1844 228 MobiDBLite consensus disorder prediction 1 22 - -
Amo12g1844 228 Pfam FAR1 DNA-binding domain 112 199 IPR004330 -
Amo12g1844 228 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1844 Amo-Chr12 87702987 87704783 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g1844 FAR1 4.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1844 - - ahf:112733025 425.246