Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1819 ATGGAAGAATTCCAAGCGTACATCCAACTTTTTCTAATTTGGCTAATCTCCACAATTGTGATTCGAGCTATTCTCACAAGACACCGCAACAATGAAAAGGAGCATCATCAAAATCCACCAAGTCCACCATCACTACCCATCATTGGACACCTTCACTTAATCTCTTCATTACAACATCAAACCTTGCACAATCTCTCAGCCCGCTATGGACCTATCTTTCAAATCTTGCTCGGCTCATTTCCTTGTATAGTAGTTTCTGTGCCAGAAATTGCCAAAGAATTTCTCAAAACTCATGATTCTTCCTTCTCTGGCCGTTTCATCAAGTCGAGCGCAGAATATTATATAACTTATGGTTTAAAGGGGCTGGTACTCACCCCTTACGGAAGCTACTTCAAGTTCATGAAGAAGCTCTGCATGGCAGAGCTTCTTGGCAAAAGAACCCTAGACCAACTTCTTCCTTTAAGACGTGAAGAAATTCTGAGGTTCCTCAAAGTCTTGCAGAAGAAAGGGGAAGCTGGAGAAAAGGTTGATGTTAGTGGTGAAATCATTACTCTCACTAATAATGTCATTTCAAGAATGACAATGAGCGTAAGGTGTTGCGAAGAAGGAGGCGGCGGTTTAGTTGACAGTGAAGAGATAAGAAAGATGGTGAAAGACATTATGGAGAATGCTGGAAAGTTTAATAATATTTCAGATTTTATTTGGTTATTTAAGAATTGGGACTTGCACGGGAAAAATAAGAGGGTTAAGGAGATTAGGAAGAGATTTGATTCAATGATAGAAAGAGTCATTAGGGAGCATGAATTGGCCAAGAAGAAAATGAAGGAAGAAGGAGATACAGGTGGGAGAGTGAAGGATCTACTTGATATTTTGTTGGACATACTTGAAGATAATAAGAAAATTGATGAGATACAATTAACTAAAGAGAATATCAAGGCTCTCATCTTGGACATATTTGTGGCAGGAACTGACACATCAGCTACAAACATCGAATGGGCTCTAGCAGAATTGATCAACAACCCGCATGTGATGGAAAAAGCAAGAAAAGAAATCGATTTAATAACTGCGAACAATAGATTAATACAAGAGTCGGATCTCACTAATCTTCCTTACTTACAAGCCATAGTTAAAGAAACACTAAGACTTCACCCTGTACTTCCACTTATAGCAAGACAATCAACCTCTGAGACCTCTGTTAATGTCTGTGGCTATGAAATTGCATCAAAGTCCTTATTATTTATTAATTTATGGTCTATGGGTAGAAACCCCAAGATTTGGGAGAATCCACTTGAGTTTAGGCCTGAGAGGTTCATTGATGATGAAAGACAATTATCAGATTTAAGGGGTCAAAATTTTCAATTATTACCATTTGGGACTGGAAGAAGAGTGTGTCCTGGAGCTTCACTAGCACTTCTAACTGTACCTGCTACTCTTGCTGCCATGATTCAATGCTTTGAATGGAAGGTTGATGGGAATGTTAGTATGGAAGAGCAACCTCACAGTGGCATCACACTTGCTAGGGCTCATCCTTTAATTTGTGTTCCTATACCTCGCTTTCGTCAATTGAGCTATCTTGGAGAAAATTAG 1587 0.3913 MEEFQAYIQLFLIWLISTIVIRAILTRHRNNEKEHHQNPPSPPSLPIIGHLHLISSLQHQTLHNLSARYGPIFQILLGSFPCIVVSVPEIAKEFLKTHDSSFSGRFIKSSAEYYITYGLKGLVLTPYGSYFKFMKKLCMAELLGKRTLDQLLPLRREEILRFLKVLQKKGEAGEKVDVSGEIITLTNNVISRMTMSVRCCEEGGGGLVDSEEIRKMVKDIMENAGKFNNISDFIWLFKNWDLHGKNKRVKEIRKRFDSMIERVIREHELAKKKMKEEGDTGGRVKDLLDILLDILEDNKKIDEIQLTKENIKALILDIFVAGTDTSATNIEWALAELINNPHVMEKARKEIDLITANNRLIQESDLTNLPYLQAIVKETLRLHPVLPLIARQSTSETSVNVCGYEIASKSLLFINLWSMGRNPKIWENPLEFRPERFIDDERQLSDLRGQNFQLLPFGTGRRVCPGASLALLTVPATLAAMIQCFEWKVDGNVSMEEQPHSGITLARAHPLICVPIPRFRQLSYLGEN* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1819 528 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 SUPERFAMILY Cytochrome P450 39 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 Gene3D Cytochrome P450 23 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 Pfam Cytochrome P450 39 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 523 - -
Amo12g1819 528 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 523 - -
Amo12g1819 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Amo12g1819 528 Coils Coil 344 364 - -
Amo12g1819 528 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1819 528 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1819 Amo-Chr12 86943915 86946204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1819 1 518 Cytochrome P450 AT5G06900 44.208 1.42e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1819 K24188 - gmx:100805931 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1819 12 86943915 86946204 Amo12g1819 12 86943915 86946204 ECH