Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1809 ATGCTGGTTTCGTTAATGTTAGCAGCCGTTTTAAAGTTAGGGAAGTGCAAGGTGCTTTATACTCATGCTTATGAGGCACAACAAAGAGAGTATGCTTTGAAGGGTCATAGAGATTTCTATTTCATGACCTTGAATGGAAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGCTGTTTCATTTATCATAGTTGTGATCCTAATTATCGAACAAAAAAGTGGTCAGTGAATGGAAAAATTTGTATTGAACTCTTTGCATTGAGGGATATTAAGCAAGTGGGGTTGCAACCTTTACTTATTCCTTTTATATGTTGA 318 0.3679 MLVSLMLAAVLKLGKCKVLYTHAYEAQQREYALKGHRDFYFMTLNGSEVIDASAKGNLGCFIYHSCDPNYRTKKWSVNGKICIELFALRDIKQVGLQPLLIPFIC* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1809 105 Pfam SET domain 44 93 IPR001214 GO:0005515
Amo12g1809 105 PANTHER SET DOMAIN PROTEINS 17 93 - -
Amo12g1809 105 SUPERFAMILY SET domain 24 92 IPR046341 -
Amo12g1809 105 Gene3D SET domain 15 94 IPR046341 -
Amo12g1809 105 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 17 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1809 Amo-Chr12 86685532 86686778 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo12g1809 SET 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1809 - - adu:107460691 137.117