Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1807 ATGAATCGCTTTTTCATCTCCGTTCATTTTTTCTTCGTTGTCTTCTCGGCAACTCTGATTTCTCAGAATTCAGCATTCACTGATCCTCTTGATGTCTCCGCTCTTCAGGATCTATACAGAACCTTAAACACCCCGCCGTTGCTGGAAAGATGGAATGGCGATGATCCCTGTCAGGAGTCTTGGACAGGAGTAGCATGCTCTGGCTCATCAGTTATACACCTAAAAATTCAAGGATTAAACCTCACTGGATATCTTGGAGGCCTTCTCCACAATCTACAGAACTTGAAGCACCTTGATGTCAGTTCTAACAACATAGTGGGAGAAATACCATCTGGTTTACCCCCAAATGTCACACACATAAATATGGCTTACAACTATCTGAGCCAAAGTATCCCACCATTATCAGCCATGAAAAAACTAAAACATCTGAATTTAAGCCACAATTTCTTGTATGGACCCATTGGCAATGTGTTTGCTGGGTTAGATGAACTCAAAGAAATGGACCTTTCCTACAACAATTTCACTGGAGATTTGCCGAGTTCATTTGGCTCCTTGAAAAACCTTGGGAAATTGTTCCTTGAGAACAACAGATTCACTGGATCAGTCACGTACCTGGCTGCGCTTCCTCTCACCGATTTGAACATCCAGGATAATCTGTTTAGTGGGATTCTTCCACCACATTTTCAGTCCATACAAAACTTATGGATTGGAGGGAATAAATTCCAAGCAGTGGACGACTCTCCTCCCTGGCCTTTTCCTTTGGACAGTGTACCAGTTGAGCATAATAGTACTCGTCCACCCATAACGCAAACGAATGCCATAGAGAATTATGCTTCTGCTAAAGCAATCAAGCACAAGAAGAAACACATGGGCCCTGGAGGAATAGCTTTTACAGTTGGTGGAGTAACATTATTGGTAGCTGGATTGACACTCTTCATTGCAACTCGTTTGAATAGATTACATTCTGAGAGACTGAAGAACTTGGAAAGTGTTGAAAGATCATTCCCTTCTCTTCCAATCAGTGACTCAAAAGATATCTCTACTACTGCCGTAGATGAGAGCCTGCAAATCCCACCTTTCAATTCTGCATCCCTTTTGGTTCCAAGGCGACTACCTTCCCAACATCATAAAAAAAATGGAGAAACAACAAGGAGGAGTTTTTCCGAAAGAGAAAAGGTAACTGGGAGGACAAAAGTTTATACAGTAGCAGAGATTCAGTTGATTACAAACAGCTTCAGTGAAGACAACCTTCTTGGAGAGGGATCTCTTGGTCCTGTTTATAGAGCTGAATTTCCAGATGGAAAGGTTTTAGCTGTGAAGACTATCACCATGGCGGGCTTGTCTTTCAGTGAAGAGGAGAAGTTCTTAGATGCAGTTTGCACCGCTTCCCGTTTAAAACATCCTAACATTGTTGCACTCAAAGGTTACTGTTTGGAGCATGGGCAGCATCTCCTTGTCTACGAGTATGTCAGAAATTTAACTCTAGATGATGCTCTTCACAGTGATGCATACAAGCCTTTGTCATTGACCATCCGTCTCCAGATTGCTCTTGGTGTTGCTCAGGCTCTGGCCTATGTGCACTCCAGTTCCCCTCCTGTAGCCCACGGAAACTTGAAGTCTTCCAATATTCTGCTAGATGAAAATCTAATGCCTCGTGTTTGTGACTGCGGCTTGACTATTTTGAGACCACTGACAAGCAACAAGGTCAAAACTCGAGCTTTGGAGATTTCTATCAGAGATGCAGGCTACATTTCACCAAACCATGGTCAACCAGGAACTAACAGCTGCACAGAAAGTGACGTCTTTGCATATGGGGTGTTGCTTTTGGAACTATTAACCGGAAGGGAACCTTTCGATGGTTCCAGGCGGAAGGAAGAGCAATATCTAGCTCAATGGGCTTCATCCAGGCTTCATGATAGCGAGACCTTGGAACAGATGGTGGATCCTGCAATTCAAAAGACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGATATACTCTCCCTCTGCCTACAGCCTGTAAAGGAATTTCGGCCACCAATGTCGGAAATAGCAGAATCACTTGCTTCTTTCATGCAACGGCTCAACGCGTCAAAGAGCGGCGCAGCAGATAGGAATGGACCAGTGTCTGATCCGCTCGAGAGGTCTTTCCGGACAACTGCATCTCATTTTATTGCTTCACCCACATTGAGCTACGTGTCCGCCTGA 2208 0.4398 MNRFFISVHFFFVVFSATLISQNSAFTDPLDVSALQDLYRTLNTPPLLERWNGDDPCQESWTGVACSGSSVIHLKIQGLNLTGYLGGLLHNLQNLKHLDVSSNNIVGEIPSGLPPNVTHINMAYNYLSQSIPPLSAMKKLKHLNLSHNFLYGPIGNVFAGLDELKEMDLSYNNFTGDLPSSFGSLKNLGKLFLENNRFTGSVTYLAALPLTDLNIQDNLFSGILPPHFQSIQNLWIGGNKFQAVDDSPPWPFPLDSVPVEHNSTRPPITQTNAIENYASAKAIKHKKKHMGPGGIAFTVGGVTLLVAGLTLFIATRLNRLHSERLKNLESVERSFPSLPISDSKDISTTAVDESLQIPPFNSASLLVPRRLPSQHHKKNGETTRRSFSEREKVTGRTKVYTVAEIQLITNSFSEDNLLGEGSLGPVYRAEFPDGKVLAVKTITMAGLSFSEEEKFLDAVCTASRLKHPNIVALKGYCLEHGQHLLVYEYVRNLTLDDALHSDAYKPLSLTIRLQIALGVAQALAYVHSSSPPVAHGNLKSSNILLDENLMPRVCDCGLTILRPLTSNKVKTRALEISIRDAGYISPNHGQPGTNSCTESDVFAYGVLLLELLTGREPFDGSRRKEEQYLAQWASSRLHDSETLEQMVDPAIQKTFSSKALSRYADILSLCLQPVKEFRPPMSEIAESLASFMQRLNASKSGAADRNGPVSDPLERSFRTTASHFIASPTLSYVSA* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1807 735 Pfam Protein tyrosine and serine/threonine kinase 416 688 IPR001245 GO:0004672|GO:0006468
Amo12g1807 735 MobiDBLite consensus disorder prediction 374 390 - -
Amo12g1807 735 SUPERFAMILY L domain-like 31 248 - -
Amo12g1807 735 Gene3D Ribonuclease Inhibitor 29 287 IPR032675 -
Amo12g1807 735 SUPERFAMILY Protein kinase-like (PK-like) 389 688 IPR011009 -
Amo12g1807 735 Gene3D Transferase(Phosphotransferase) domain 1 491 709 - -
Amo12g1807 735 MobiDBLite consensus disorder prediction 370 390 - -
Amo12g1807 735 Gene3D Phosphorylase Kinase; domain 1 373 489 - -
Amo12g1807 735 Pfam Leucine rich repeat 139 198 IPR001611 GO:0005515
Amo12g1807 735 ProSiteProfiles Protein kinase domain profile. 412 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1807 735 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 707 - -
Amo12g1807 735 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 10 707 - -
Amo12g1807 735 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Amo12g1807 735 Pfam Leucine Rich Repeat 94 113 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1807 Amo-Chr12 86665811 86670764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1807 27 735 Strubbelig Receptor Gene Family AT5G06820 53.964 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Amo12g1807 PK_Tyr_Ser-Thr 1.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1807 - - cam:101498175 1079.7