Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1805 ATGGATAATTTTCAAGAATACATAGCAATCTTCTCAATTTGGCTAGCAGCTACAATATTGTTCCAAGCCATACTCACCAAAACTCGATCATCGAAGCTTCACCTTCCACCTAGTCCATTGGCCTTACCAATCATTGGACACTTCCATTTACTACAACCTTCTCTTCACAGAGCTGTTCAAAAGATTTCAAACCGTTATGGACCCTTGATTCAGCTCTATCTCGGCTCTAAGCCCACCGTCTTCGTCGGCTCGGCCGAAATAGCCAAAGAGATCTTGAAAACACATGAAGTCTGTTTCGCTAACAGACCTGCAAATATTGCAATTAGTTCCCTAACTTATGACAAATCCGATTTAGCGTTCGCGCCTTACGGAACCTTCTGGAAGTTCATGAAGAAGCTCTGCATGTCAGAGCTTCTTAATGGACGGATGCTTGAACTCCTCTCCCCGATTAGGGAAGAGGAGATCAAGAGATTGTTGGAGACGCTTCGAAAGAAAGGCGAAGCGAGCGAGGCAGTGAACGTGGCGGATGAGCTCTTAAAGCTAACAAATAGCATAGTGATGAGAATGGCTATAAGCAAAAGCTGCTTTGACATTCACAATGATGATGCTGATAAGGTGATAGAAAGGGTGAAAGAATCTGCCTTGTTGAGTGCAAAGTTTAACTTGCAAGATCACTTTTGGTTTTGTAAAGGGTTTGATTTTCAAGGCTTCGGGAAGAAAGTGAAGGAGGTTCGTGAAAAGTTTGATATCATGTTAGAGGGTATCGTTCAAGAACATGAAGAGGATAGAAGATGTCGAAAGTCAACGGGAAATAATGATGGTGCCAAGGATGTACTTGATGCTCTTCTAAGTATTTCAGAAGATCAAAGCTCAGAGGTTAAAATATCCAGAGACAATATTAAAGGCTTCTTGATGGATATGTTTGGAGGTGGAACTGATACAACTGCAGCAACAATAGAATGGGCACTTGCAGAACTAATTAACCATCCAACTGCCATGGAAAAAGCAAGAAATGAAATTGATTTATTGGTAACAAGTAATGGAAAACATAGAATAGTGATGGAATCTGACATACCAAATCTTCCTTATATCCAAGCCATAGTTAAAGAAGCACTAAGGCTTCACCCTCCATCACCATTCATAATGAGAGAGTCATCTGAGAATTGCACCATTGATGGATTTCACATTCCAGGAAGAACTAAAATCCTCATAAATGTGTGGGCTATTGGAAGAGATCCAAAGAACTGGGATAACCCTCTCGAGTTCAAGCCTGAAAGGTTTCTTGGAACGAAGGGTCAAACTTTTGAAGTTAGAGGTCAACATTTTCAATTCTTGCCTTTTGGAAGCGGTAGAAGAGGGTGTCCTGGAACATCTTTAGCACTCAATGTTGCTCATACAAGCCTTGCTGCTATGATTCAATGCTTTAAATGGAAGGTTGTTGGGGAGAATATTGTTAATGGTGTTATTGATATGGAAGAAGGACCTTCATTTATTCTCTCAAGAGCTCAACCACTTATTTGTATCCCAAAATCAAGGCTTGTACCTTTTCCATCTGTTTCATGA 1563 0.4069 MDNFQEYIAIFSIWLAATILFQAILTKTRSSKLHLPPSPLALPIIGHFHLLQPSLHRAVQKISNRYGPLIQLYLGSKPTVFVGSAEIAKEILKTHEVCFANRPANIAISSLTYDKSDLAFAPYGTFWKFMKKLCMSELLNGRMLELLSPIREEEIKRLLETLRKKGEASEAVNVADELLKLTNSIVMRMAISKSCFDIHNDDADKVIERVKESALLSAKFNLQDHFWFCKGFDFQGFGKKVKEVREKFDIMLEGIVQEHEEDRRCRKSTGNNDGAKDVLDALLSISEDQSSEVKISRDNIKGFLMDMFGGGTDTTAATIEWALAELINHPTAMEKARNEIDLLVTSNGKHRIVMESDIPNLPYIQAIVKEALRLHPPSPFIMRESSENCTIDGFHIPGRTKILINVWAIGRDPKNWDNPLEFKPERFLGTKGQTFEVRGQHFQFLPFGSGRRGCPGTSLALNVAHTSLAAMIQCFKWKVVGENIVNGVIDMEEGPSFILSRAQPLICIPKSRLVPFPSVS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1805 520 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PANTHER CYTOCHROME P450 93A2 5 517 - -
Amo12g1805 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Amo12g1805 520 Pfam Cytochrome P450 36 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 Gene3D Cytochrome P450 21 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 SUPERFAMILY Cytochrome P450 36 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1805 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1805 Amo-Chr12 86367433 86374619 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1805 1 512 Cytochrome P450 AT5G06900 46.004 3.86e-167 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1805 K24188 - gmx:100811919 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g1805 12 86367433 86374619 Amo12g1805 12 86367433 86374619 ECH
Amo12g1805 12 86367433 86374619 Amo02g1980 02 65329978 65333945 hybridization
Amo16g0157 16 2092713 2095435 Amo12g1805 12 86367433 86374619 PCT