Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1800 ATGGCAGGAACAGATACCTCAGCTATCACCATTGAATGGGCTTTTGCTGAGTTAATCAACAACCCACATGTAATGAAAAAAGCAAGACAAGAGATTGATTCAGTAACAAGAAGAAACAGAATAATAGAAGAATCAGATCTTCCAAACCTTCCTTACTTGCGAGCCATAGTTAAAGAAACACTAAGGCTTCATCCTGCGGCACCACTTTTAGGGAGACAATCAACTGAAATCTCTAATGTTTGCGGCTATGAAATTCCATCAAAGTCCTTATTGTTTATTAACCTGTGGTCTATGGGTAGGGACCCTAAGATTTGGGAGAACCCTCTTGAGTTTAGGCCAGAGAGTTTCATTGAAGAAGGACAATTGGATGTGAGGGGACAATATTTTCAACTAATGCCCTTTGGAACTGGAAGAAGAGTGTGCCCTGGAGCTTCACTAGCGCTTCAAATTGTGCCTAGTAATCTTGCTGCCATGATTCAGTGTTTTGAATGGAAGGTTGATGGGATTGTTAGTATGGAAGAGAAACCTGGCATGACAGTTCCAAGAGCTCATCCTTTAATTTGTGTCCCTGTGCCTCGCTTTAGTGTCCTTCCTTCTATTCATTCTGTGTAG 612 0.415 MAGTDTSAITIEWAFAELINNPHVMKKARQEIDSVTRRNRIIEESDLPNLPYLRAIVKETLRLHPAAPLLGRQSTEISNVCGYEIPSKSLLFINLWSMGRDPKIWENPLEFRPESFIEEGQLDVRGQYFQLMPFGTGRRVCPGASLALQIVPSNLAAMIQCFEWKVDGIVSMEEKPGMTVPRAHPLICVPVPRFSVLPSIHSV* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1800 203 Coils Coil 25 45 - -
Amo12g1800 203 PRINTS P450 superfamily signature 141 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS P450 superfamily signature 55 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS P450 superfamily signature 132 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS P450 superfamily signature 2 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 Gene3D Cytochrome P450 1 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 198 - -
Amo12g1800 203 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 134 143 IPR017972 GO:0005506|GO:0016705
Amo12g1800 203 PRINTS E-class P450 group I signature 94 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS E-class P450 group I signature 141 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS E-class P450 group I signature 11 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS E-class P450 group I signature 54 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PRINTS E-class P450 group I signature 131 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 SUPERFAMILY Cytochrome P450 1 193 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1800 203 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 198 - -
Amo12g1800 203 Pfam Cytochrome P450 1 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1800 Amo-Chr12 86326325 86326936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1800 2 193 Cytochrome P450 AT5G06900 54.167 6.48e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1800 K24188 - gmx:100805931 329.717