Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1796 ATGGATGAAGATAGCAGCAGCTCTTGGATAAGGAGGGCTAAGTTCTCTCACACAGTTTGTCACCGATTGGAGTATTCCAGATTGGGCTCTTTTCCTAACAGCATTCAGCGGCAGCAGAACTCAGGGACTCTGAAATCAAGGCCCGCAGCAGCACAACCAGCGCCAGCGCCGGCGCCGGCTGCGGCACCTGCAGTTCCTTATAATCCAAACTCTGTATCTAACGTGTCACAGGTTCAGAGAAATCCAATAACGAATAGGCAGAGATCTTTGTCCCCTTTGCCGGTAACTCTTCTCTCCGATGCGTTTAAGGAAGCCCAGCATGAGCAGAAGAGGTTCTCAACTCCAACCACTCCTCGGAGGAAAGACCAGGAGAAGAGAATTATGGGGAAGTTAATGAACCAGGACTCTAAGGACTGTAGAGGAACTAAGGCGTTGTCGAATTCAAAATCGCCTCAAGGTAGTCCAATTGGGCAACTTGCATCAATGAAATTGGGAGAGAAGTCAAAGCACCGCAAGGAATCTGCGTGGACGAAGTACTTTGACCATGGTGGAGGAAGGGTCACTGCTGTGGAAACAGCTGAAGAGTGGACTGTGGACCTCTCTAAGCTGTTCCTTGGTGTCAGATTCGCTTATGGGGCTCACAGTCGGCTTTACCATGGTATGTATAACGAAGAGCCTGTTGCTGTGAAGATTATCCGCGTGCCAGATGACGACGAAAATGGAAACATGGCTTATCGGTTGGAGAATCAGTTCATTAGAGAGGTCTCGCTTTTGTCTCGCCTCCACCATCAGAATGTTATAAAGTTTGTAGCAGCGTGCAGAAAACCACCTGTTTATTGTGTTATCACTGAATATCTAGCAGAAGGTTCCTTAAGAGCATATTTGCATAAATTGGAGAAAAAGACTATTTCTATGCAGAAACTAATTGCTTTTGCTCTGGATATTGCGCGTGGGATGGAATATATACACTCTCAAGGTGTCATTCATAGAGACCTTAAACCAGAGAATGTACTTATTAGCGAAGACTTTCACCTTAAAATTGCTGATTTTGGGATTGCTTGTGAGGAAGCATATTGTGACTTATTAGCTGACGACCCTGGTACGTACCGCTGGATGGCACCTGAGATGATCAAACGTAAATCCTACGGGAGAAAGGTTGATGTATATAGTTTTGGGCTTATCCTGTGGGAAATGGTAACCGGAACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCAGTGGTAAATAAGAATTCAAGGCCTGTTATTCCTTCCGATTGCCCACCTGCAATGCGCGCTTTAATCGAGCAATGTTGGTCCGTGCATCCAGACAAGAGGCCTGAGTTCTGGCAGGTTGTTAAGGTGTTAGAACAATTCGAATCATCACTTGCATTGGACGGAACCTTGACTCTGGTGCAAAACCCTTTGTGCCAGGATCATAAGAAAGGGCTTCTTCATTGGATTCAAAAACTTAGTCCTTCTCATCAAAATAGTGGTCCGGCACTTAAACCTAGATTCTCATGA 1533 0.4573 MDEDSSSSWIRRAKFSHTVCHRLEYSRLGSFPNSIQRQQNSGTLKSRPAAAQPAPAPAPAAAPAVPYNPNSVSNVSQVQRNPITNRQRSLSPLPVTLLSDAFKEAQHEQKRFSTPTTPRRKDQEKRIMGKLMNQDSKDCRGTKALSNSKSPQGSPIGQLASMKLGEKSKHRKESAWTKYFDHGGGRVTAVETAEEWTVDLSKLFLGVRFAYGAHSRLYHGMYNEEPVAVKIIRVPDDDENGNMAYRLENQFIREVSLLSRLHHQNVIKFVAACRKPPVYCVITEYLAEGSLRAYLHKLEKKTISMQKLIAFALDIARGMEYIHSQGVIHRDLKPENVLISEDFHLKIADFGIACEEAYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMVTGTIPYEDMTPIQAAFAVVNKNSRPVIPSDCPPAMRALIEQCWSVHPDKRPEFWQVVKVLEQFESSLALDGTLTLVQNPLCQDHKKGLLHWIQKLSPSHQNSGPALKPRFS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1796 510 MobiDBLite consensus disorder prediction 104 137 - -
Amo12g1796 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Amo12g1796 510 MobiDBLite consensus disorder prediction 139 157 - -
Amo12g1796 510 Gene3D Phosphorylase Kinase; domain 1 191 286 - -
Amo12g1796 510 MobiDBLite consensus disorder prediction 67 92 - -
Amo12g1796 510 MobiDBLite consensus disorder prediction 104 165 - -
Amo12g1796 510 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 486 - -
Amo12g1796 510 Gene3D Transferase(Phosphotransferase) domain 1 287 485 - -
Amo12g1796 510 SMART serkin_6 203 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1796 510 MobiDBLite consensus disorder prediction 29 47 - -
Amo12g1796 510 MobiDBLite consensus disorder prediction 29 92 - -
Amo12g1796 510 SUPERFAMILY Protein kinase-like (PK-like) 186 459 IPR011009 -
Amo12g1796 510 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 486 - -
Amo12g1796 510 CDD STKc_MAP3K-like 212 459 - -
Amo12g1796 510 PRINTS Tyrosine kinase catalytic domain signature 367 377 IPR001245 GO:0004672|GO:0006468
Amo12g1796 510 PRINTS Tyrosine kinase catalytic domain signature 283 296 IPR001245 GO:0004672|GO:0006468
Amo12g1796 510 PRINTS Tyrosine kinase catalytic domain signature 386 408 IPR001245 GO:0004672|GO:0006468
Amo12g1796 510 PRINTS Tyrosine kinase catalytic domain signature 321 339 IPR001245 GO:0004672|GO:0006468
Amo12g1796 510 PRINTS Tyrosine kinase catalytic domain signature 430 452 IPR001245 GO:0004672|GO:0006468
Amo12g1796 510 Pfam Protein tyrosine and serine/threonine kinase 211 459 IPR001245 GO:0004672|GO:0006468
Amo12g1796 510 ProSiteProfiles Protein kinase domain profile. 203 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1796 Amo-Chr12 86055423 86059358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1796 1 498 MAP Kinase Kinase Kinase AT5G58950 58.824 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo12g1796 PK_Tyr_Ser-Thr 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1796 - - gmx:100784454 783.482