Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1795 ATGAATGCAAGCAAGAAGATAGCAGATGCTAAACTCGCGAAAGATTTTCAGGCAGTGTTGAAAAAATTTCAGAAGGCACATCGTCCTGCGGCAGAGAGGGAAACTGCTTACACCGAACCCCATTTGTTCCACAAGCTGCTCCATTCAGCTAATGAAGCATATGCTAATTCTGGTAAGACTCCAGAACAGCGTGCCCTTCTTGTGGAATTCAGAAGGCAGAAGGTCTTGTTTTTAGATAATGAGATTGTCTTCAATGAGGCTATCATTGAAGAAAGAGAGCATGGCATTTAA 291 0.4261 MNASKKIADAKLAKDFQAVLKKFQKAHRPAAERETAYTEPHLFHKLLHSANEAYANSGKTPEQRALLVEFRRQKVLFLDNEIVFNEAIIEEREHGI* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1795 96 PANTHER SYNTAXIN 1 96 IPR045242 -
Amo12g1795 96 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 96 - -
Amo12g1795 96 Gene3D - 1 41 - -
Amo12g1795 96 SUPERFAMILY t-snare proteins 5 96 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1795 Amo-Chr12 86038123 86039072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1795 1 96 SNARE and Associated Proteins AT5G46860 62.500 8.48e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1795 - K08488 gmx:547656 127.487