Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1703 ATGAAGTCGCCACGTCATCAAGTTTCTAACCCCACACGTAAAATAGCAAAAGAGTATAAGTTCGTTTACAACACGCTTACAAATACAGAAATGATGGTGGTGAAGCTCAAGTCATCAGAGACACCACTCGGCCACTCCTTCTTCCTTGACCACCACCGTAGCCTGTTCGCCAGAGATCGCCCACTCTTCCTCGCGTTCATCCCTCTCCGTCGCGTTCTTCCTCTCGCCATTGTTCCTCGCGTTCATCCCTCCCTCTTCGTGGTTCAGACGTTCTCACCGTCATCCGTAGTCTTCTGTTCTTGCCGCCTTGACGTCCTCCGTGCTTGCTGCCTTGCAATACTCAGTTCCTGCCGCATCACCGTCCTCCGTTCTCGTCGGTTCGCCGTCCTCGTTTCGGCGAATCAACGTCCTCGGCTTCATTGTTCAGGACTTCAGACTAGTAATTGTTTTTGGGTCCTCAAGCTTCAAACAAACATGGCTGACAAAGCGGTTACCATCAGAACAAGGAAGTTTATGACTAACAGGCTCCTCTCCAGAAAGCAATTCGTCATTGATGTTCTTCATCCAGGGAGGGCAAATGTTTCTAAGGATGAGCTTAAGGAGAAGCTTGCTAGAATCTATGATGTTAAGGACCCCAACACGGTGTTTGTGTTCAAGTTCCGCACCCATTTTGGAGGTGGCAAATCCACTGGTTTTGGTTTGATTTATGACACTGTTGAGAATGCTAAGAAGTATGAGCCTAAGTACAGACTTATTAGGAATGGACTTGATACTAAGGTTGAAAAGTCGAGGAAGCAAATGAAGGAGAGAAAGAACAGGGCAAAGAAGATCCGTGGAGTAAAGAAGACCAAGGCTTCTGATTCTGCCAAGGCTGGAAAGAAGAAATGA 888 0.4741 MKSPRHQVSNPTRKIAKEYKFVYNTLTNTEMMVVKLKSSETPLGHSFFLDHHRSLFARDRPLFLAFIPLRRVLPLAIVPRVHPSLFVVQTFSPSSVVFCSCRLDVLRACCLAILSSCRITVLRSRRFAVLVSANQRPRLHCSGLQTSNCFWVLKLQTNMADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKDELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDTVENAKKYEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGVKKTKASDSAKAGKKK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1703 295 PANTHER 40S RIBOSOMAL PROTEIN S24 159 295 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo12g1703 295 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 164 266 IPR012678 GO:0003735|GO:0005840|GO:0006412
Amo12g1703 295 Pfam Ribosomal protein S24e 183 261 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo12g1703 295 PANTHER 40S RIBOSOMAL PROTEIN S24 159 295 - -
Amo12g1703 295 MobiDBLite consensus disorder prediction 260 295 - -
Amo12g1703 295 ProSitePatterns Ribosomal protein S24e signature. 224 246 IPR018098 -
Amo12g1703 295 Hamap 30S ribosomal protein S24e [rps24e]. 162 264 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo12g1703 295 Gene3D - 156 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1703 Amo-Chr12 81223335 81225913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1703 159 290 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 87.121 7.51e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1703 K02974 - gmx:100499852 239.195