Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1684 ATGTCATGGATTGGTGTACCAGACTTCTACAATTGGAACTGTGTTAAGCTGAGATATTGTGATGGAGCTTCATTCATTGGAGACGCTATCTTTGATAATAGGGTGCAACATGTTACACAGTGTAGCAAAACAGAATGCATCAACTTCAAAGTTCAGATACCATTGCACTTTGAAGCTCTCATTTCTCATCCAGATACTAATCACAATAAACTCAAGATTGGGACTTCGGAGGAGGTACCATTTCAGAAGCTAAAAATGGTTGAAAAGAGATTAAGCATAACCTTAACAATAACATTCGCTGCTATTTCCTTTTCCACTGCAATCTCTGCTGTCCATGTTCTGTTAGCATATGTCTTGAGTAAAAAATGTAAGGGTTTGAAGTCCAAGATTCTTGAGCTAGAGGCATCTCTCAAGTCTTCCTTAGATAAATGTGCCTCTGAAAAGACCTTGAGAAAAGTACTATCACAACCTAAATATGAAAATCTGAAGCTGACATATTACCCTATGGCATCGATTGGTACCATCTGCTCATGCTTCTCTACGAGGAATTGGACACCGAGGCAACCGTTACTTGTACCACTTGCTAGAGCCTGTTTGGTTTTTTATGCCACTCGTGTTCTGCTAGCATCTCTTGAGGGTCAAGCTGAATATTCTCATTGCTGGGTTTTATATATATTTCATTTAAATACAGATCTTGAGAAACTATGGAAGCATCCATCTCAATCAGGGTTTAAGGCAAAGGTGGGAGTTCTGAGACTTAAAGGAGGAAGAATGGGAGTGTTCGCCACACGATCCCCATATCGTCCATGTCCCATTGGACTTACAGTTGCAAAGGTTCAAGGACCATTTTTTCAAGTCAAAAGATACACAAGTACACAGCTATCAAGCATGCAGCAGAAGCTTGACGATCTTTGTGAGCAGTTAAATAGCACTCAAGAGCTCTCAACTGCTGCCTTCAACAAATTATCAAACAAGGATGGAGAATTGCAATCGAGTGAGGCGTTTGACACTGAGAAAATCAAGTTTGTTGATTGTGGTTGTTGGCATTGTGAACAACATTATGACCTTTCCAATGAATTGATGATTATGAAGCTCTTCTGTTTACTCAACATTTTATGA 1119 0.3959 MSWIGVPDFYNWNCVKLRYCDGASFIGDAIFDNRVQHVTQCSKTECINFKVQIPLHFEALISHPDTNHNKLKIGTSEEVPFQKLKMVEKRLSITLTITFAAISFSTAISAVHVLLAYVLSKKCKGLKSKILELEASLKSSLDKCASEKTLRKVLSQPKYENLKLTYYPMASIGTICSCFSTRNWTPRQPLLVPLARACLVFYATRVLLASLEGQAEYSHCWVLYIFHLNTDLEKLWKHPSQSGFKAKVGVLRLKGGRMGVFATRSPYRPCPIGLTVAKVQGPFFQVKRYTSTQLSSMQQKLDDLCEQLNSTQELSTAAFNKLSNKDGELQSSEAFDTEKIKFVDCGCWHCEQHYDLSNELMIMKLFCLLNIL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1684 372 ProSiteProfiles TsaA-like domain profile. 169 279 IPR023370 -
Amo12g1684 372 PANTHER TRNA (ADENINE(37)-N6)-METHYLTRANSFERASE 94 280 - -
Amo12g1684 372 Gene3D - 168 298 IPR036414 -
Amo12g1684 372 PANTHER UNCHARACTERIZED 94 280 IPR040372 -
Amo12g1684 372 SUPERFAMILY YaeB-like 165 281 IPR036413 -
Amo12g1684 372 Coils Coil 294 314 - -
Amo12g1684 372 Pfam Pectinacetylesterase 7 32 IPR004963 GO:0016787
Amo12g1684 372 Pfam tRNA-methyltransferase O 185 280 IPR023370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1684 Amo-Chr12 79678750 79681852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1684 7 33 Carbohydrate Esterase AT5G23870 77.778 4.18e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1684 K22900 - gmx:100812211 247.669