Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1667 ATGGCCTTTTCACCCACTGAAGAAGGATCAATTACTACATTCACCAATCCAACACTAGGCGATGAACAATTTAATGTGGATGAATTAGACATTCAAGAACAAGTAGGGTGCAAGTTCGACGAAATTACCGATGTCGTTGTGACTAGAAAGGATGAGCTGGACGATGGAGGCCAGTTGCCGGATCATAGTGGCGTAGGTGAAGAGGAAATTCCAGTCGTAGGAATGAGTTTTGGTTCATTGCCTCTCGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACGAATTTTGACAAGACGCGGAAGGAATCAAAGATACCGGTTAATCAATCTATTTACTGCACGCGTGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAATAGAATTACAGCCACGAGATGCAAAGCAAGGATGTATGTCGTGCTGGACAATGAGAATGAATGTTGGGTTGTGTCTAGATTAGAACTGAGGCATTCTCACCCTTGTTCGGCTGAGAAAGCTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCTAACCATGACGTGGCTCGGAGTGATGAAAGCAACAACTTGTTCAGGCATCTGTGTTCAGAGTTCTATAACGTTGCGCAGGAGTTTGTTGCTTGTGATGAGGAAGCAGCCATCTTGCGAGCTGCCCTTTGGGATGCAAAGTCCAAGCTGATTGATTACCGTGCCAGCATGCGTTCCAATACTGCTGCTGCGTCTCAGAATACCGTGCCCACACAGAGCACGGGCGGTGCGGTTGTACATGACATTCAGGGACCCTCAAGAGTCAAGACCAAAGGACGGCCTAAGGGTAAGAGACTTGGAGCAGAGTTGGACAAGTCAATTAAGAAATCAATGCAAAAAAGGAATAGGAAATCACACCCGGTATATAATGATCATCATGGATCCCTTAATAAAAGATGTGAGGATTCTACTATGTGGAACTCATCGGAAGGTGGCGGATTCATGCACCTGTTGAATTCCTTTAGGCATATATAG 1047 0.4537 MAFSPTEEGSITTFTNPTLGDEQFNVDELDIQEQVGCKFDEITDVVVTRKDELDDGGQLPDHSGVGEEEIPVVGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKESKIPVNQSIYCTREGYRESRVNAATRANRITATRCKARMYVVLDNENECWVVSRLELRHSHPCSAEKAVHYHEYRELTMHANHDVARSDESNNLFRHLCSEFYNVAQEFVACDEEAAILRAALWDAKSKLIDYRASMRSNTAAASQNTVPTQSTGGAVVHDIQGPSRVKTKGRPKGKRLGAELDKSIKKSMQKRNRKSHPVYNDHHGSLNKRCEDSTMWNSSEGGGFMHLLNSFRHI* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1667 348 Coils Coil 345 348 - -
Amo12g1667 348 MobiDBLite consensus disorder prediction 286 300 - -
Amo12g1667 348 MobiDBLite consensus disorder prediction 252 270 - -
Amo12g1667 348 Pfam FAR1 DNA-binding domain 85 174 IPR004330 -
Amo12g1667 348 MobiDBLite consensus disorder prediction 252 320 - -
Amo12g1667 348 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 47 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1667 Amo-Chr12 78826429 78830185 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo12g1667 FAR1 4.8e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1667 - - ahf:112730161 385.185