Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1599 ATGAGAGAGGAGGAGCCGTCACCAAACGCGTCGCCGCCGCTGGAGGAGCTTCGCTCTTCGCCGTCGCCGAGGAGGGGAAAGAGGAGCTGCTCCCGTCGCGCCAGTCACCGTCGTGCTTCCTGGTTGCCGATGAAGGAGCCGCGAGAACCGTTGCCGTCGCGGAGGAGGGGGACGCGCGAGAGGGAGCCGTCAGTGTGGTCGCCGTCGCAGCTGTTGAGAAATCCAAGGAAATCAAGTTCTGGGTTGATTCTTTTCTGGTTCAGTAAGATGAGTTCTCAGGAAAAGTCTCTGACTTTGGGTGGAAATGAACAACAACATGTTGATGCTGATGCTGATGCAGCAGCTTCTTGCAGAAGAACAGTTTCTCTGCCAGCTCAAAAGTTTCTACTATTGCAGAAGAACAGTCGTCGTGCTGCCGTCTCCCTCTCCTTCACTCATCGCACCTCTGTTTCCATCTCTCAACCCTCCTCCTCGCCACCGGCTAGATATGCACTTCAAATGGCTGGTGTATTGAGCTCTAATGGTCAAGACTTATGGACTGATGGAGAAACGGTGTTGATTCAAGTTGGAGATATACTAGATCGAGATGAAGAAGAAATTGCTATCTTGTCCTTGTTGCGATCATTGGATAAACAGGCAAAGGCAAAAGGTGGAGCTGTGTTTCAGGTCCTTCTTAGAGGCCCAAAGAACTTCAGGGAAGCTGTGAAACACTTGGGTCTTGCTCTTGGTGTTCTTTACAGCTATATCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAAGGTTAGAGGAAGGAAGAATAGCAAAGGACTTGGGGTTTAA 825 0.5042 MREEEPSPNASPPLEELRSSPSPRRGKRSCSRRASHRRASWLPMKEPREPLPSRRRGTREREPSVWSPSQLLRNPRKSSSGLILFWFSKMSSQEKSLTLGGNEQQHVDADADAAASCRRTVSLPAQKFLLLQKNSRRAAVSLSFTHRTSVSISQPSSSPPARYALQMAGVLSSNGQDLWTDGETVLIQVGDILDRDEEEIAILSLLRSLDKQAKAKGGAVFQVLLRGPKNFREAVKHLGLALGVLYSYIKPYVRSKGRKFEKVRGRKNSKGLGV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1599 274 MobiDBLite consensus disorder prediction 39 62 - -
Amo12g1599 274 MobiDBLite consensus disorder prediction 1 75 - -
Amo12g1599 274 Pfam Ribosomal protein 60S L18 and 50S L18e 221 271 IPR021131 -
Amo12g1599 274 PANTHER SHEWANELLA-LIKE PROTEIN PHOSPHATASE 1 161 224 - -
Amo12g1599 274 Gene3D - 205 272 - -
Amo12g1599 274 PANTHER SHEWANELLA-LIKE PROTEIN PHOSPHATASE 1 161 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1599 Amo-Chr12 73420729 73424533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1599 223 274 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 69.231 7.69e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1599 - - aip:107622497 149.058