Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1596 ATGTTAGGGGCTGGTGTTAGTCAGGTTGCTGGCCTGCTATGGTGTTTGAGGTTTGTTATGAAAAATGGCGCCAAGGGATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTCCTCAGGGCAACCAGTCAAGTACTACATTGATTCTGCTGTAAGACATGTACTCCTTAGGCAGGGATTTGGATAA 228 0.4781 MLGAGVSQVAGLLWCLRFVMKNGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKYYIDSAVRHVLLRQGFG* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1596 75 Gene3D - 2 74 IPR036419 -
Amo12g1596 75 SUPERFAMILY Ribosomal protein S3 C-terminal domain 10 74 IPR036419 -
Amo12g1596 75 Pfam Ribosomal protein S3, C-terminal domain 15 73 IPR001351 GO:0003735|GO:0006412
Amo12g1596 75 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 15 73 - -
Amo12g1596 75 PANTHER BNAC06G00510D PROTEIN 15 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1596 Amo-Chr12 72845933 72846407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1596 16 73 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 89.655 3.20e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1596 K02985 - qsu:112008532 112.849