Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1534 ATGCAGAGAAGAGCCCTTTTCAGCGGACTTATGCGACTCAGATTTCTAAAGCATGAGAGATTCCTGTTGCAACTCTCAAACTGTCGATCCCCGAGCCAGCGCCGTCGCAATGGAGCAGACATCCGTAGTGTGATTTTCTCTGTGCAGAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGATTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAAGTTGCTGAGATCTGATTCTCTCATTAGTGAGTCAGTGCTTAAACATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCGGTGCCGGTGTTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTAAAAGACATCACATGGGCTGCAGAGGCTTGGATTGATGTTGAAAGAGTTCATACAATTGCATTAGGAGCCAAGAAGAACTAG 492 0.4715 MQRRALFSGLMRLRFLKHERFLLQLSNCRSPSQRRRNGADIRSVIFSVQRVAMAISPSGINPAVGSKLSPDSPEALTLANWICCKLLRSDSLISESVLKHLWHHQDAILCCSLKSVPVFIFANQAGLDMLETTLVALKDITWAAEAWIDVERVHTIALGAKKN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1534 163 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 21 142 IPR044830 GO:0003700
Amo12g1534 163 Pfam MEKHLA domain 81 144 IPR013978 -
Amo12g1534 163 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 21 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1534 Amo-Chr12 67560365 67564157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1534 41 141 Homeobox Transcription Factor Family AT5G60690 72.727 2.78e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1534 K09338 - ahf:112742636 236.113