Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1487 ATGCTGCAATTGTTGGTGCTCTGTGCAGGGATTGTAGCAAACAAGTGTACTTGGGTGGATTTGACAGCACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGTTCCGTAGCATTGATGCAGATATCAATTTCAACGTCAGCGATTATGATGAAGATATAAAGCAGATGAGTAACTTTAAAAAAATTGAAATGCAGAGAAAAGCAGCATTGCCGTTGAGGGACACAAAAAGCGGCAATGCGAACAAGATGAAGGCTCTGTGCGGCAAGGAAGCTTTGGTGAAGCTTCTGCGATGGCATTTTGGTTACCCTAATTAA 321 0.4361 MLQLLVLCAGIVANKCTWVDLTAHAAARAYDRAAIKFRSIDADINFNVSDYDEDIKQMSNFKKIEMQRKAALPLRDTKSGNANKMKALCGKEALVKLLRWHFGYPN* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1487 106 SMART rav1_2 10 53 IPR001471 GO:0003700|GO:0006355
Amo12g1487 106 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 65 - -
Amo12g1487 106 Gene3D AP2/ERF domain 20 49 IPR036955 GO:0003700|GO:0006355
Amo12g1487 106 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 22 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1487 Amo-Chr12 64356105 64356722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1487 22 66 AP2-EREBP Transcription Factor Family AT2G39250 62.222 8.40e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1487 K09284 - aip:107625266 181.415