Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1483 ATGGAGGAGAGAAGAAGGGGGTGCTCGGTCGCCGCTGAAACTCCACCGCCATTGCTAGGGCTTGTTGCCTTCGCTGTTCTGCCACCGTCGGGCTGCTGTTCCACCGCCAAGGAGCTCGAAGGGAGTACCCCGTGTCACCAGAAAAACCCTAGCCGCTGCTATTCTTCAAGCTGTGTCGCCACCGTCGAATCTGGTCCAGCCGCCGTCCCCACTCCTACTGCTCCAGCACCGTCGCAGCTTGTCTATCGTCGTGTTGCTTCGCCTCTGTTCCACGACCGTTGTCTGTTCCATTTCTGTCGCCTGTTCCCCACTAATCCCTCTCCCTTATCTCGGACTTATGGTTTATTACATTACTACAAAGAATTCATTGATGATGCATACGAAAAAGGTTCTCTCTTACTTCCCTTGAAAAAGGTTCATACGAAGAAGGCCTTGGTTCTTGAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAATAGGATCCAAAATGAGTCACAAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTTTGTACTTTGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGGGGATACTTCCACCGTGATCTGAAGCCTGGTACATTTATCATTGCATCCGAATCCTTTCTTTCCGAGGCAAAAAAACGAGAGCAGGCCTTTACGAATAGAGGACACCGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTCAATTCAGTCGCAGATGTTAGGTGCTCTATTTGA 912 0.4638 MEERRRGCSVAAETPPPLLGLVAFAVLPPSGCCSTAKELEGSTPCHQKNPSRCYSSSCVATVESGPAAVPTPTAPAPSQLVYRRVASPLFHDRCLFHFCRLFPTNPSPLSRTYGLLHYYKEFIDDAYEKGSLLLPLKKVHTKKALVLEIDEELLQEVVNMGFDRNQLVESLCNRIQNESQRKMNHPNIVKLKEVIRESDILYFECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPGTFIIASESFLSEAKKREQAFTNRGHRNQLRSMGEAKNLLQYMFNSVADVRCSI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1483 303 ProSiteProfiles Protein kinase domain profile. 102 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1483 303 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 176 256 - -
Amo12g1483 303 Gene3D Transferase(Phosphotransferase) domain 1 149 262 - -
Amo12g1483 303 CDD UBA_SnRK1_plant 149 178 - -
Amo12g1483 303 SMART serkin_6 133 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1483 303 Pfam Protein kinase domain 178 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1483 303 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 148 171 IPR015940 -
Amo12g1483 303 SUPERFAMILY Protein kinase-like (PK-like) 178 256 IPR011009 -
Amo12g1483 303 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 176 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1483 Amo-Chr12 64083989 64087450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1483 181 263 Core Cell Cycle Gene Families AT1G66750 29.545 1.99e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Amo12g1483 Pkinase 6.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1483 K08829 - aip:107642397 165.622