Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1477 ATGAGAAAAAGATATGTTTTTAAAGAAGCGGTTGCTCCATGGGACAAAGAAGTTATATCTGACCCCAGTACTCCAAAGCCTAACCCACAACTATTCTTTTATGCACCTGAAGGAAAGTCTGATCACTACTTTGAAATGCAAGATGGGGTTATTCACGTATATCCAAATAAAGACTATCTATACTACAGCTGTATCAGCAAAAAATTGAAAATGCTGACTCCTGTTTTACATCTTGGAGCTGGAGCATGTGCTGGAATAATTGCCATGTCCGCAACTTATCCAATGGATATGGTTCGAGGCAGGATAACTGTACAGGTGGCTAGCTTTCCATTTGATGATTATAATTGCCCACCACTTCAACTAGTTATCTCTTTCTGTCATAGTGCATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTGGTTGTCCACTGTAAGGCTGGAATGAACAAGGACTTGTTCTACCCAGTCAGATTGGAAGCTGTGAAACATTTTGGTCCTGGTCCTGGTGTTCCTCACAGCCATACCAAGCCTTATGTACAATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAAAAAGAACAACAAAGGACTTAGTGTTTAA 606 0.4043 MRKRYVFKEAVAPWDKEVISDPSTPKPNPQLFFYAPEGKSDHYFEMQDGVIHVYPNKDYLYYSCISKKLKMLTPVLHLGAGACAGIIAMSATYPMDMVRGRITVQVASFPFDDYNCPPLQLVISFCHSAYSWLKLDIENVVVVHCKAGMNKDLFYPVRLEAVKHFGPGPGVPHSHTKPYVQSKGRKFERARGKKNNKGLSV* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1477 201 MobiDBLite consensus disorder prediction 168 201 - -
Amo12g1477 201 PANTHER AMP DEAMINASE 1 59 IPR006329 GO:0003876|GO:0032264
Amo12g1477 201 Gene3D Protein tyrosine phosphatase superfamily 72 151 IPR029021 -
Amo12g1477 201 Pfam Ribosomal protein 60S L18 and 50S L18e 160 198 IPR021131 -
Amo12g1477 201 PANTHER AMP DEAMINASE 1 59 - -
Amo12g1477 201 SUPERFAMILY Mitochondrial carrier 66 108 IPR023395 -
Amo12g1477 201 Gene3D - 1 71 - -
Amo12g1477 201 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 102 150 IPR029021 -
Amo12g1477 201 Pfam Mitochondrial carrier protein 73 108 IPR018108 -
Amo12g1477 201 Gene3D - 153 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1477 Amo-Chr12 62961982 62963805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1477 93 151 Protein tyrosine phosphatase (PTP) family AT3G19420 67.797 1.46e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1477 K01490 - adu:110278182 138.272