Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1457 ATGGATTGGCCTCTAAGGCTGAAAGTGGCATTAGGAGCTGCAAAAGGACTTGCTTATCTGCATTCAAGCTCTTCTGTTGGGATCCCTATTATTCACAGAGATTTCAAATCCACCAATGTTCTTTTAACCTCCAATTTTGAAGCAAAGATATCTGATTTCGGGCTAGCTAAACTGATGCCAGAAGGACAAGAGACACATACTGGTCCTAGCAGTTTTGCTGATGCTGTTGTTGGGAGGATTGATCAGAGTACAAAGGTTCTTGCAGAAGGTGCTTATGAGAAGATCTTCAGGCAAATTTCTGAGACTGCTCCAGTAATGGGAGTTCTTGATAACCCACTTTCTTACCAAACGGGTGATCAGACTCAGTCGAGCTATTATAAGAAGCTATTGAACAAAACATATCACAGAAGTATAAGAAACAGAAGAAAGATAAAAGAAGAAAGGAAATCAGGTGCAATAAATAGTCAGCATTATGAGGAAGATCTAGAATTGCCCTTATTTGATATGTGCACAATTACTCTTAGAACAAGTAATTTTTCAAGTGACAATATACTAGGGACATGTGGTTTTGGATCAGTTTATAAGGATTCAAGGATGGCACTTGTTTATTACTTGTCAGTTAATAATAAAAAGATAGATAGCAATGAGTATATTTGTGGAAGGCTAATGCTAGAGAGACAAAGGAAGAACTAA 693 0.3766 MDWPLRLKVALGAAKGLAYLHSSSSVGIPIIHRDFKSTNVLLTSNFEAKISDFGLAKLMPEGQETHTGPSSFADAVVGRIDQSTKVLAEGAYEKIFRQISETAPVMGVLDNPLSYQTGDQTQSSYYKKLLNKTYHRSIRNRRKIKEERKSGAINSQHYEEDLELPLFDMCTITLRTSNFSSDNILGTCGFGSVYKDSRMALVYYLSVNNKKIDSNEYICGRLMLERQRKN* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1457 230 PANTHER OS01G0750732 PROTEIN 1 67 - -
Amo12g1457 230 Pfam Protein kinase domain 10 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1457 230 SUPERFAMILY Protein kinase-like (PK-like) 1 66 IPR011009 -
Amo12g1457 230 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1457 230 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL28-RELATED 1 67 - -
Amo12g1457 230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Amo12g1457 230 Gene3D Transferase(Phosphotransferase) domain 1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1457 Amo-Chr12 61177526 61180368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1457 1 66 Receptor kinase-like Gene Family AT4G02010 57.576 1.39e-19 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Amo12g1457 Pkinase 1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1457 - - aip:107627279 328.176