Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1445 ATGGGGAACACTTGTGTTGGTCCTAGCATTAAAAATGGGTTTCTTCAGTCGGTTTCTGCGGCAATGTGGAGGTCGCAATCGCCAGATGAATTGGCATCCAATCGAGAAAGTGTAAAGGAGGAAGCAACCAATGAACCTGAATCTGGGTTGCCTGTCCAGAACAAACCTCCTGAGCAGTTAACTATGCCAAAACATGAGGCAAAAGAAAAATCAAAACCAGAATCAAAGTCAAAAGTGGAAACGGAACCGGAACAGGAGAAGAGTAAACACAGGAAACCAGCTTCTGTGAAGAGAGTTTCGAGTGCAGGGCTTCGTGTTGATTCTGTTTTACAAAGAGAGACTGGTAATTTCAAGGATTTCTTCAGTTTGGGAAGAAAACTTGGACAGGGACAGTTTGGGACAACATTTTTATGTGTTGAGAAGGCAACAGGACAAGAATTTGCCTGTAAATCCATTGCAAAGAGGAAGCTGGTAACTGACGAGGATGTCGAGGATGTGAGGAGAGAAATTCAGATAATGCACCACTTGTCTGGCCATCCAAATGTTATTTCCATTAAAGGTGCTTATGAGGATGCGATAGCGGTTTATGTTGTGATGGAATTATGTGCAGGTGGTGAGCTTTTCGATAGGATTATTCAGCGTGGACATTACACTGAAAGAAAGGCTGCCGATCTTATACGGACCATAGTTGGGGTTGTGGAAGCTTGTCATTCTCTTGGTGTGATGCATAGAGACCTTAAACCTGAGAATTTTCTTTTTGTGAATCAGCATGAGGATGCACTTCTCAAAACCATTGACTTTGGATTATCCGTGTTCTTTAAGCCAGGTGATATATTCAATGATGTGGTTGGCAGCCCATATTATGTTGCCCCAGAAGTTCTGCGAAAGAGGTACGGTCCTGAAGCAGATGTTTGGAGTGCTGGAGTTATCCTGTATATTCTTTTGAGTGGAGTTCCTCCATTTTGGGCAGAAAATGAACAAGGAATATTTGAACAGGTTCTGCGTGGTGATCTTGATTTCTCGTCAGATCCCTGGCCTGCAATTTCGGAAAGTGCTAAAGATTTAGTAAGGAAAATGCTTGTTCGGGATCCTAGAAGGCGGATGACTGCCCATCAAGTACTATGTCATCCATGGATTCAAGTTGATGGTGTTGCTCCAGACAAGCCACTTGATTCTGCTGTACTAAGTCGCCTGAAACAATTTTCTGCTATGAATAAACTTAAGAAAATGGCTCTTATAGTTATTGCAGAGAGCTTATCTGAAGAAGAATAG 1272 0.4253 MGNTCVGPSIKNGFLQSVSAAMWRSQSPDELASNRESVKEEATNEPESGLPVQNKPPEQLTMPKHEAKEKSKPESKSKVETEPEQEKSKHRKPASVKRVSSAGLRVDSVLQRETGNFKDFFSLGRKLGQGQFGTTFLCVEKATGQEFACKSIAKRKLVTDEDVEDVRREIQIMHHLSGHPNVISIKGAYEDAIAVYVVMELCAGGELFDRIIQRGHYTERKAADLIRTIVGVVEACHSLGVMHRDLKPENFLFVNQHEDALLKTIDFGLSVFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAENEQGIFEQVLRGDLDFSSDPWPAISESAKDLVRKMLVRDPRRRMTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSEEE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1445 423 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 423 - -
Amo12g1445 423 MobiDBLite consensus disorder prediction 22 99 - -
Amo12g1445 423 SMART serkin_6 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1445 423 Gene3D Transferase(Phosphotransferase) domain 1 207 384 - -
Amo12g1445 423 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 65 423 - -
Amo12g1445 423 SUPERFAMILY Protein kinase-like (PK-like) 119 380 IPR011009 -
Amo12g1445 423 Pfam Protein kinase domain 122 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1445 423 Gene3D - 394 419 - -
Amo12g1445 423 MobiDBLite consensus disorder prediction 61 91 - -
Amo12g1445 423 ProSitePatterns Protein kinases ATP-binding region signature. 127 154 IPR017441 GO:0005524
Amo12g1445 423 ProSiteProfiles Protein kinase domain profile. 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo12g1445 423 Gene3D Phosphorylase Kinase; domain 1 123 206 - -
Amo12g1445 423 CDD STKc_CAMK 120 378 - -
Amo12g1445 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1445 Amo-Chr12 60403909 60410786 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1445 1 423 EF-hand Containing Proteins AT5G04870 76.600 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo12g1445 Pkinase 1.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1445 K13412 - gmx:100797449 751.895