Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1436 CGGAAAATAGAATCCGTCGATAATTATGTCAACCTAACTTCATCCCCACCCTATCGACCTCCTTTCACATACACAAAATCACAGATCAAACGAGTTGTTCCTCTCTCCTTCAATGAGCTTCTCCGTCCTGCACGAGATTATTCTTCTTCTTTCCTCACTCATAGCGCCACCACCACCACCCTAACCACAGCAGCTACCTTCTCCTTCTTCTCCTCTCTTTTAAACAATGAACCACATACCGGCGCCACCTGTAGCAGCATCTGTCCCCACCACCGCCGCGCCTTTCTCTCTCTCTTTTTATCCCCACTCAGATCTGGCTCGCATATCTTCTCAGCGCCGCAGCCATCATCACCTCTAATAGAAAGAAAGCAAAAAGGAAAAGATGTTGAAGGTGAAGGTGTATGCGGACCGCATGTCCCAGCCATCTCGTGCCGTTCTTATCTTCTGCAAAATTCAACGAGATTAAAGTTGAAATCTCCAAAAGACAGCAGTTATCTCCCGAATTTGCAGAAACTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTCGAGAGTCACGTAATTCTTATCTATCTTGCTTCTGCCTTTCCTGGTATTGCTAATCATTGGTTGGATGTATGGTGTGGCCCTGGAATTGGACTCACATCAGATCATGCTTCTGCTTCTGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAACCTTGATGCTGTTGAGAGAGCAACACATAGGGAAGAGCCTCTTCTCTTCCTCAACTCAATGACAGTTCTTGATTGCTTAATTGATCAAAGACTATACATTGGTTTGCCTGATGCCAAGCAAAGAGTCCAAATTTTTGGTCTTGTCTTCCGAACTGTTGGATTCTCAGGAGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGATGGAAACTGTTATAGAGAAACAAAGCCTTAACCTAGTGTTTTTGACTGGTCATGTTGTGTTAGCTCACTTATTTCCTCGGTTTGACTGGCATGCATTTTCGCAGCTCCTGCCAGGTGGTAAGGTTAGCCCACTCAGTGATATTGATAAATAG 1071 0.4444 RKIESVDNYVNLTSSPPYRPPFTYTKSQIKRVVPLSFNELLRPARDYSSSFLTHSATTTTLTTAATFSFFSSLLNNEPHTGATCSSICPHHRRAFLSLFLSPLRSGSHIFSAPQPSSPLIERKQKGKDVEGEGVCGPHVPAISCRSYLLQNSTRLKLKSPKDSSYLPNLQKLPAIVDGRFKLFESHVILIYLASAFPGIANHWLDVWCGPGIGLTSDHASASVDCVVARKNASSRRNLDAVERATHREEPLLFLNSMTVLDCLIDQRLYIGLPDAKQRVQIFGLVFRTVGFSGADIRNLVNEAAIMMETVIEKQSLNLVFLTGHVVLAHLFPRFDWHAFSQLLPGGKVSPLSDIDK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1436 356 Pfam AAA+ lid domain 283 305 IPR041569 -
Amo12g1436 356 PANTHER ATP-DEPENDENT PROTEASE 311 352 - -
Amo12g1436 356 PANTHER ATP-DEPENDENT PROTEASE 263 307 - -
Amo12g1436 356 SUPERFAMILY Thioredoxin-like 164 198 IPR036249 -
Amo12g1436 356 Pfam Glutathione S-transferase, N-terminal domain 167 193 IPR004045 -
Amo12g1436 356 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 263 307 - -
Amo12g1436 356 Gene3D Glutaredoxin 146 200 - -
Amo12g1436 356 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 311 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1436 Amo-Chr12 59983479 59986979 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1436 169 203 Glutathione S-transferase Gene Family AT5G41210 77.143 4.34e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1436 K03798 - ahf:112747943 118.627