Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1419 ATGCTATTTTTGATAGATGCTTCAATTTTTGTTGTAGTTGCTCCATTGAATGATCTATGTTCTCCACCTAATGAGATAGGCTGGTGTGCTTTTGTTCTTGCTACAAATTTGGCTGAATTGATCCAATTTAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTAGATTTGCTGAAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATCTTGCACTAGATGAGGCAGATAGGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGCCCCCCTCCAGACTAGCCTCCGATTTCTTGTCAAGATACATTTTTCTCGCTGTTATGAGCAAATACATTTGTTTTTATATTTAA 381 0.3911 MLFLIDASIFVVVAPLNDLCSPPNEIGWCAFVLATNLAELIQFKGVDILVATPGRLVDLLKRARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPSRLASDFLSRYIFLAVMSKYICFYI* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1419 126 Gene3D - 10 121 IPR027417 -
Amo12g1419 126 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 44 117 - -
Amo12g1419 126 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 44 117 - -
Amo12g1419 126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 109 IPR027417 -
Amo12g1419 126 Pfam DEAD/DEAH box helicase 42 98 IPR011545 GO:0003676|GO:0005524
Amo12g1419 126 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 126 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1419 Amo-Chr12 57870062 57870919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1419 45 101 Eukaryotic Initiation Factors Gene Family AT3G13920 45.614 1.33e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1419 K11594 - aip:110267265 147.132