Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1418 CTCTGTTGTTCATCCCCAACTCAGATAGAGCTCATCGTCGGCGCTTGCACTCTCTCCTCTGCTGGCGCTCCCTCCGTCGTCTCCCCTAACCCGTCTCTGCTGGCGCTCGCATTCCCTGCGCTCACTACTCACGGTGTTGGTCAGCTAACGGAGGTCGCCTTTCCTTCCTCCGCGCCGCTATTCTCTGCCCTCCTCCCTCGTCATCTTGCTCAATCTTCCACCACCTTCGAAGTCCTCACTGCATGCATATGGCATTTTAATGCACATTTTGACTGTGCCGTCGCCGCCGTTAGAAGAGCACTCAATCGTAACAAAGGCAACGACTGGCCTTCTGCTTTCGGCGCTCACCGAGCCCGCTATCTCTGCGCCATCGCTGCCAAGGTCGTCGAGAGAAAGGATCACCTTGCTAAGCTTGAATCCCTTGATTGCAGAAAACCACTCGATGAAGCTGCCTGGGACATGGATGATGTTGCTGGTTGCTTTGAGTTTTACGCTGACCTTGCCAAGAAACTCGACACTAAGCAGAAGGCACCCATTTGGTGCGCAGAAATTGTGATTACACTTTAA 567 0.5379 LCCSSPTQIELIVGACTLSSAGAPSVVSPNPSLLALAFPALTTHGVGQLTEVAFPSSAPLFSALLPRHLAQSSTTFEVLTACIWHFNAHFDCAVAAVRRALNRNKGNDWPSAFGAHRARYLCAIAAKVVERKDHLAKLESLDCRKPLDEAAWDMDDVAGCFEFYADLAKKLDTKQKAPIWCAEIVITL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1418 188 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 87 179 - -
Amo12g1418 188 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 184 IPR016162 GO:0016491
Amo12g1418 188 Pfam Aldehyde dehydrogenase family 92 177 IPR015590 GO:0016491
Amo12g1418 188 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 87 179 - -
Amo12g1418 188 SUPERFAMILY ALDH-like 76 178 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1418 Amo-Chr12 57813812 57814522 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1418 91 179 Aldehyde Dehydrogenase Gene Family AT1G74920 76.404 2.23e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1418 K00130 - aip:110265331 220.32