Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1415 ATGTCTTCGAACCCATCGATTATTGAAAATCTCCCATTCCAATCAACCACGTTCACCATACTCGCCCTTCTACTATTTCTTTACACACTATCTGTCATAACAAGAAATCGCAAAGGCCCATCCAAATCACCACTGGAGGCTGGTGGTGCATGGCCTTTAATAGGGCACCTCCACCTTTTTGGCGGCTCACAACCACCTCACGTGACGCTAGGCGAAATGGCCAAAAAGTACGGACCAATTTTCGCCATACGACTCGGAGTTCACAAGACTTTGGTTGTGAGCAGCAAGGAGATGGCCAAAGAGTGTTTCACAATTAACGACAAGGCGTTTGCTAGCAGGCCTACAGGCATTGCCTTTGAGGTGTTGGGTTACAATTTTTCAATGATAGGGTTCTGCCGTTACAGCGCCTATTGGCGCTATGTGCGTAAATTGGCCACCTTGGGGATCCTCTCTACCAACCAGACAGAGATACTGAAGCATATCATGGAGTCGGAGGTGAAGATCGCAATGAAAGCGAGCTATGATTTGTGGTTATTGAAGAAAACTTGTTCGGAAAAGGTTACCGAGATGAAGAAATGGATAGGGGATATAACCTTGAACATCATGTTTCGAATAGTGGTGGGGAAACGTTTTGGTGTTGTGGTGGGAAGCGACTGCGGCGGCAACGAGGAGAACGTACGGCTTTGGAAAGCAGTTAGAGAGCTTTTCGAGCTGAGTGGGTCATTCTCGATTTCAGATGCGATGCCATATTTGAGATGGTTAGATTTAGATGGGAAAGAGAAGGCAATGAAGCGAACCAGAGATGAGTTGGACTACTTCGTTCGAATTTGGCTTGACGAACACAAATGGAAGAGGCTTTATGGCGTAGGAAAACAAAAAGATCATCACCATGATGATTTCATGGACACGCTTTTGTCTACCGTTGATGAAGAATTTGATGGTCGTGATCCTGATACTATAATCAAAACCACATGCCTGGCCATGATTATAGGTGGAACAGACACTACTACCGGAACTGTAACTTGGGCTCTCTCGTTACTTCTCAACAATCGAAATGTTCTAAACAAAGTGAGAGACGAATTGGACTCACAAATTGGGAGGAAAAAAATGGCAGTAGAGGAATCAGACTTGAACAGCTTGGTATATCTCCAAGCCGTCATCAAAGAAACAATGCGCTTGTACCCTGCAGTACCACTAGGTGCTCCACATGAGTCCATGGAAGATTGCAATATTGGTGGTTATCATATCCCTGCTGGTACACGCCTCTTGACTAACATATCAAAGATTCATCGTGATCCTACAATATACGATGATCCTTTGGAATTTCGACCAGAGAGATTTCTTAAGGAACATAAGGATATCGACTTTAAGGGCCATAATTTTGAATTCATTCCGTTCGGTGCTGGTAGAAGAATGTGTCCTGGGATCCCATTTGGCCTTCAAATGATGCAACTAATGCTTGCTAATTTGTTACATGGGTTTGATATTGTTACTGTTGATGGAAAGCCAGTAGATATGGTTGAAGAGGTTGGGCTAACCAGCGTCAAAGCTTCTCCACTCCATGTTATTCTTACTCCGCGTCTCTTCGCTCCACTTTATTATGGTAAAAACTAA 1614 0.4405 MSSNPSIIENLPFQSTTFTILALLLFLYTLSVITRNRKGPSKSPLEAGGAWPLIGHLHLFGGSQPPHVTLGEMAKKYGPIFAIRLGVHKTLVVSSKEMAKECFTINDKAFASRPTGIAFEVLGYNFSMIGFCRYSAYWRYVRKLATLGILSTNQTEILKHIMESEVKIAMKASYDLWLLKKTCSEKVTEMKKWIGDITLNIMFRIVVGKRFGVVVGSDCGGNEENVRLWKAVRELFELSGSFSISDAMPYLRWLDLDGKEKAMKRTRDELDYFVRIWLDEHKWKRLYGVGKQKDHHHDDFMDTLLSTVDEEFDGRDPDTIIKTTCLAMIIGGTDTTTGTVTWALSLLLNNRNVLNKVRDELDSQIGRKKMAVEESDLNSLVYLQAVIKETMRLYPAVPLGAPHESMEDCNIGGYHIPAGTRLLTNISKIHRDPTIYDDPLEFRPERFLKEHKDIDFKGHNFEFIPFGAGRRMCPGIPFGLQMMQLMLANLLHGFDIVTVDGKPVDMVEEVGLTSVKASPLHVILTPRLFAPLYYGKN* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1415 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Amo12g1415 537 Pfam Cytochrome P450 50 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 SUPERFAMILY Cytochrome P450 50 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 Gene3D Cytochrome P450 30 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PANTHER CYTOCHROME P450 82C3-RELATED 42 533 - -
Amo12g1415 537 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 384 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo12g1415 537 PANTHER CYTOCHROME P450 42 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1415 Amo-Chr12 57790505 57810438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1415 49 533 Cytochrome P450 AT4G31940 47.773 1.51e-166 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1415 - - gmx:100778017 652.899