Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1368 ATGGAAGGTCTAGCACTAGGAGAAGACCCACTTAGCGACTTCGATTGTGACGCCTTTCTTGAACAATTACTAGATCCTCACGTTGACGATATCTTCCATGAGAAGGAGGTTCCTTCTGCCGTAGCAGGTGGCGGTGTTTTATCAGAGATCGAGAACTTGTTGATGGCCGATGATGAAGACGACGGCGCTGTCATTCCCGCTACTCCGTCGTTGGAATCTGACTACGACAAGCTTCTTGCTGAAATACTCGTCGAGCCGCACGGTGACTCCGACGACGGTTCCACTCCTTCTATCGAAGATCCCGATAAGGTCAGGGCTGATGCAGCGGGCCCCAAGGAGGTTGGCATTGAACCCGTTTCGAAGAAGCTATTAAGGAAAATGAGGAACAGAGATGCTGCTGCGAGATCAAGAGAGAGGAAGACGAAGTATGTAAAGGACCTTGAGATGAAAAGTAGGTATTATGAAGGGGAATGCCGTAGACTGGGGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGTCTTTGCTTACAGGCACGAGGTGCATTGAATGCTTCCATGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTGTTGTTCATGGGTGTCATGTGCCAATTCAGTCTACGACTGACAGCCTGGTTAACGGTACTACTTCCAAGAGAAAACAAGGAGCAGAGAAACGCAAGAAGGGTAGCTCGAAAAGGACCCGAAAGTGATATATCTGAGTGTTTCCGGGTGCAATCCTCTACAAAGAGTAGAAGTTGTCGGGCTTCAAGGAGAAAGATGAAATTCTTTATTTCTTCTATATTGTGCAGATGGAGTGATTACTATAATAAAAAAACTGAAAGAATTGTTTAA 891 0.4725 MEGLALGEDPLSDFDCDAFLEQLLDPHVDDIFHEKEVPSAVAGGGVLSEIENLLMADDEDDGAVIPATPSLESDYDKLLAEILVEPHGDSDDGSTPSIEDPDKVRADAAGPKEVGIEPVSKKLLRKMRNRDAAARSRERKTKYVKDLEMKSRYYEGECRRLGHLLQCCYAENHALRLCLQARGALNASMTKQESAVLLLESLLLGSLLLFMGVMCQFSLRLTAWLTVLLPRENKEQRNARRVARKGPESDISECFRVQSSTKSRSCRASRRKMKFFISSILCRWSDYYNKKTERIV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1368 296 CDD bZIP_HY5-like 122 173 - -
Amo12g1368 296 PANTHER BZIP TRANSCRIPTION FACTOR 60 14 278 - -
Amo12g1368 296 Pfam bZIP transcription factor 120 160 IPR004827 GO:0003700|GO:0006355
Amo12g1368 296 SUPERFAMILY Leucine zipper domain 121 177 IPR046347 GO:0003700|GO:0006355
Amo12g1368 296 MobiDBLite consensus disorder prediction 86 110 - -
Amo12g1368 296 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 119 161 IPR004827 GO:0003700|GO:0006355
Amo12g1368 296 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 14 278 - -
Amo12g1368 296 Gene3D - 120 181 - -
Amo12g1368 296 SMART brlzneu 117 181 IPR004827 GO:0003700|GO:0006355
Amo12g1368 296 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 139 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1368 Amo-Chr12 52858489 52861324 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1368 134 277 bZIP Transcription Factor Family AT1G42990 45.578 7.54e-17 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo12g1368 bZIP_1 5.1e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1368 - - ahf:112743660 537.339