Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1338 AGTCTCTATATATATGTCCAAACTCCGGATTGCTTAAGGGTGATTGTTCATGCTCGCAGTCACCGTGAAGGAAAAGCTGTCAATGGAGCAATGAAAAACTCCGTTTCAGATCGCAGTTTCTACATTGAGAGCGACGACGAAGATGAGGAGAAGGATTTGAACAATGTAGATCAAGGAAACGATTCAGACGATTCGCATGAATGGAATGATCACGACGCAATGAGAAAACCCAGTTCCTACAGCATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTGTTAGGCAGTGTACCATCACCAAATATTGGATTTTTGGGCACTACCTCCCTATCAAGATTAGGAAGTTCTTTTATTGTTCCACCTTTGATAAAGAGGCACCCCCCAGTTCCAGATACAATTCCGTCAGCAAAGAAACCTCTGCTACAACCAACAGACATTGATGATCAGCGGCGTAGCTCCCATATCCTGCATCCTCCCCATCTGTTGAGGGGTTCTACTAGGAATGTGATTTCCAAGGTTGCTCATGATCATGAAGTTCATTTTTCTGGCCAATGCACTTTTGGTCAAGCTGTGCTTAATGGCATAAATGCTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCCCTCAAAGAAGGTGGATGGGTTGCGCTTTCAGTCTTGTTTATATTTTCAGCTTTCAGCTTCTATACTGGGTTGCTATTACGTCACTGCTTGGATAGTGAACCTGGGCTTGAGACATACCCTGACATTGGCCAAGCAGCTTTTGGTACTAGTGGACGCATTTTCATTTCTGTAATATTATACTCGGAATTATATGCTTGTTGCATAGAATATATAATTTTGGAGAGCGATAACTTATCTTCATTGTTTCCAAATGCGCACCTAAGTTTAGGTGGACTTGAATTGAACCCTCATGTTCTATTTGCAATTTTGACCACCTTGGCTATTCTTCCTACTGTTTATCTTCGTGATTTGCGCATTCTGAGTTACCTCTCAGCATGTGGTGTTCTTGCAACAACTTTGGTGGTTCTCTGCTTGTTTTGGGTTGGCTTAATAGATAATGTTGGCATTCACAGCAAAGGAACTACAATCAATCTTGCAACTTTTCCTGTTGCTATGGGTCTCTATGGTTACTGCTACTCAGGACATGCTGTGTTCCCAAACTTGTATACAGCCATGGCAAACAGAAATCAATTCCCTGCAGTGCTTTTAGTATGTTTTGCACTCTGTACAGTTATGTATGCTGCAGTAGCTATTATGGGATACACAATGTTTGGAGAATATACATTGTCTCAGTACACTCTTAACATGCCTCAAGGCATAGTGGCCACCAAACTTGCTGTGTGGACAACGGTGGTGAATCCATTTACCAAATATGCATTGAGTTTGACTCCAGTGGCAAAGTGTCTAGAGGAGCTGATACCATTAAACGACCCCAAGTTTAACTTATATTCAATCTTCATCCGAACAATGTTAGTGGTTTCTACACTGCTTGTTGGTCTTTCTGTTCCCTTTTTTGGTGAGTCTTTCTTCTACTTAACTATGTATTTCATCGCATTCACTGCCAAGAACCGTATTAGAGTCTGGGTTCAGAATGAAATTCAATATTTCTTCATACAACAAATTTGTTGA 1638 0.4139 SLYIYVQTPDCLRVIVHARSHREGKAVNGAMKNSVSDRSFYIESDDEDEEKDLNNVDQGNDSDDSHEWNDHDAMRKPSSYSMAWPQSYRQSIDLLGSVPSPNIGFLGTTSLSRLGSSFIVPPLIKRHPPVPDTIPSAKKPLLQPTDIDDQRRSSHILHPPHLLRGSTRNVISKVAHDHEVHFSGQCTFGQAVLNGINALCGVGILSTPYALKEGGWVALSVLFIFSAFSFYTGLLLRHCLDSEPGLETYPDIGQAAFGTSGRIFISVILYSELYACCIEYIILESDNLSSLFPNAHLSLGGLELNPHVLFAILTTLAILPTVYLRDLRILSYLSACGVLATTLVVLCLFWVGLIDNVGIHSKGTTINLATFPVAMGLYGYCYSGHAVFPNLYTAMANRNQFPAVLLVCFALCTVMYAAVAIMGYTMFGEYTLSQYTLNMPQGIVATKLAVWTTVVNPFTKYALSLTPVAKCLEELIPLNDPKFNLYSIFIRTMLVVSTLLVGLSVPFFGESFFYLTMYFIAFTAKNRIRVWVQNEIQYFFIQQIC* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1338 545 Pfam Transmembrane amino acid transporter protein 186 510 IPR013057 -
Amo12g1338 545 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 55 514 - -
Amo12g1338 545 MobiDBLite consensus disorder prediction 55 74 - -
Amo12g1338 545 MobiDBLite consensus disorder prediction 44 79 - -
Amo12g1338 545 PANTHER OS05G0424000 PROTEIN-RELATED 55 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1338 Amo-Chr12 49893738 49904151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1338 31 517 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.158 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1338 K15015 - gmx:100781123 687.182