Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1300 CTTCGTAGTCTCTGCTCTCACCATCACTGGTCACCATCATCGTATCTGCGTTCATTGTTTCCGCTCAACCAAGTTGTCTCTGCTCTCACCGTTGCATCTCACCCTTGTTGTCTCTGTGCCGACCGAATGCTTAAGCACAATGTTGGTGGGTTTCGATTTGACCAGAGAGAGGTAGTTCATAATTGCAAGCTTGATCCTTGTGTTCAGAGAGTTTTATCAGGAAGACGAGCTTTGAGGGCATTGAGGGCAGTGGTGAGGCTACAGGCTATATTTCACAGAAGGCTAGCGAAGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCATGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTAGGAATGTGAGGAACTCTCCAGAAAGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATCAAGGAGGTTGAGGGTTCTTGGCCACATCGCAAGCGAACACCGAAGAATTCTGTGCCCCAACTCCACTGGAGCTGA 510 0.4961 LRSLCSHHHWSPSSYLRSLFPLNQVVSALTVASHPCCLCADRMLKHNVGGFRFDQREVVHNCKLDPCVQRVLSGRRALRALRAVVRLQAIFHRRLAKKQAAVTLRCMHALVRVQARVRARNVRNSPERKAVQTLLDQYRNQADPIKEVEGSWPHRKRTPKNSVPQLHWS* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1300 169 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 69 138 - -
Amo12g1300 169 MobiDBLite consensus disorder prediction 146 169 - -
Amo12g1300 169 PANTHER IQ-DOMAIN 5-RELATED 69 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1300 Amo-Chr12 46818778 46822392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1300 70 152 IQD Protein Family AT1G72670 53.012 2.44e-18 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1300 - - adu:107464314 118.242