Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1256 ATGTTGTGGTTGTCCACTGTAAGGCTGGAACGAACAAGTTCTTTCCAATTGCTGAGGAGTCAATGGATTACTATAATCAGAAATGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTGGAAGCTGTGAAACATTTTGATCCTGGTCCTAGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTAAGAGGGCTAGAGGAAGAAAGAACAACAAAGGACTTAGTGTTTAA 255 0.4157 MLWLSTVRLERTSSFQLLRSQWITIIRNDVLMEKDLFCPVRLEAVKHFDPGPSVPHSHTKPYVRSKGRKFKRARGRKNNKGLSV* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1256 84 Pfam Ribosomal protein 60S L18 and 50S L18e 43 82 IPR021131 -
Amo12g1256 84 PANTHER 60S RIBOSOMAL PROTEIN L18 42 82 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo12g1256 84 MobiDBLite consensus disorder prediction 61 78 - -
Amo12g1256 84 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 42 82 - -
Amo12g1256 84 MobiDBLite consensus disorder prediction 49 84 - -
Amo12g1256 84 Gene3D - 30 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1256 Amo-Chr12 43650680 43651229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1256 43 84 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 66.667 3.81e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1256 K02883 - tcc:18613591 64.3142