LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo12g1253	ATGTTGGTTTATGGCTGGTCAGTCTTCTCTGCTCATTGGTCACTGATTCTGCTGGCATTAATTAAAATTGAAGGGAAGGGGTCCATAAAGGTTGAAGTTAAAAGGAAAATAGAACTGGGTCCTAATGCATTTCCCCATCAGTCCACCTTTCATGTTGTGCTGGACCTTAACTTGAGTTCTCAACTTTTCTGGTTATTAAGGAAAGGTTTCCAGAAGATTCATGTTAGACTTCTTAGAGAGCTTGAGAAGAAGTTCAGTGGCAAGCATGGAACAGTTCTAGATTTCAGGTCATCTAATGTTAAGAAGTTAACCAAGCGTCAAGCTTGTATATTTTTGTGTTTCAAAATGTGGTGTGTTTTGTGCAACCACTCTACTGGCCATGCCGGGAAATCTGCAGTTAGATGGACTGAGATACAAAGTTGGTTTAAGGATGGGCTCCAAGACTTACTAGATGACCCTAATAATGAATTGATGATTCCCAAAGACCCTAAATGTAATAAAGAAGATAGAACTAGATTAACGCTAAATAATGTCGAGATGATTACTGCTAGGACTATCTATTATTCGGAAGCAGCGTTAGCAAGGCAAGATTGTTGGTATGGATATGTGTGTAGGACACAGCAGCACAGTGAAGACCATGCTCGTAAAAGGAACCATGTGTGCTGTCCAACTAGAGGCAATGCCTCCTAA	690	0.4043	MLVYGWSVFSAHWSLILLALIKIEGKGSIKVEVKRKIELGPNAFPHQSTFHVVLDLNLSSQLFWLLRKGFQKIHVRLLRELEKKFSGKHGTVLDFRSSNVKKLTKRQACIFLCFKMWCVLCNHSTGHAGKSAVRWTEIQSWFKDGLQDLLDDPNNELMIPKDPKCNKEDRTRLTLNNVEMITARTIYYSEAALARQDCWYGYVCRTQQHSEDHARKRNHVCCPTRGNAS*	230

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo12g1253	229	ProSitePatterns	Ribosomal protein S7e signature.	76	89	IPR000554	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo12g1253	Amo-Chr12	43212042	43215359	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo12g1253	64	88	Cytoplasmic Ribosomal Protein Gene Family	AT1G48830	76.000	3.71e-06	44.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo12g1253	K10644		-	aip:110266860	91.2781