Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1232 ATGGAAGGCTCAGTGCAAGAGTCAAGTGCGACGTCTCTGAAAATCTCACTCTTAAAGCCAATGCTCAGAGGAGTCTCAATGCACAACATAAACAGTCGTCTTAACATGATGAACAAAAACAGAGAGATATCCCTTTGTGGACTGAAAATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGTTTAGAATAAGAGCAGAACACCCAGATGATAATCAAGCCATATTGAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGGTCAGTTGA 318 0.4182 MEGSVQESSATSLKISLLKPMLRGVSMHNINSRLNMMNKNREISLCGLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAILNDRVKGQLKVTRAFGAGFLKRVS* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1232 105 SUPERFAMILY PP2C-like 51 102 IPR036457 -
Amo12g1232 105 Gene3D - 31 105 IPR036457 -
Amo12g1232 105 Pfam Protein phosphatase 2C 45 103 IPR001932 -
Amo12g1232 105 PANTHER PROTEIN PHOSPHATASE 2C 28 103 IPR015655 GO:0004722|GO:0006470
Amo12g1232 105 PANTHER PROTEIN PHOSPHATASE 2C 32 28 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1232 Amo-Chr12 40948675 40949638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1232 27 103 PP2C-type Phosphatase Gene Family AT2G46920 67.532 1.33e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1232 - - ahf:112721125 196.438