Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1228 ATGGCTTTGACAGCTGATCCTATTGCTTCACTAGTTGACACAACATTCATTGGCCAAATAGTGGCAAATAAAGTAGGTGAAAGAAGCTTATTACTGAAGCTTAGGTATCCTGAGATTTGCATAGAATTCAAGTATGATCCAAGTTTCCCCATTCAAGGCTTATACTATGACAAGTCTAAAGGGTGCCTAATGAAGTTGGACTTCATCGGGTCAATTGAGCCAGATGGATGTTATTTTGGTCGACGCAGGAATCATAAGCTTCTCCTGACATATAATTTCCACAACTATATACTTCGAAGCATGGATGATGAATTTGGTGACATTGTTGGTGTTAGGTAA 339 0.3894 MALTADPIASLVDTTFIGQIVANKVGERSLLLKLRYPEICIEFKYDPSFPIQGLYYDKSKGCLMKLDFIGSIEPDGCYFGRRRNHKLLLTYNFHNYILRSMDDEFGDIVGVR* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1228 112 SUPERFAMILY HAD-like 31 82 IPR036412 -
Amo12g1228 112 Pfam 5' nucleotidase family 28 90 IPR008380 -
Amo12g1228 112 PANTHER FI20020P1 27 91 - -
Amo12g1228 112 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 27 91 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1228 Amo-Chr12 40149085 40150347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1228 84 111 MLO family AT1G26700 64.286 2.34e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1228 - - adu:107459540 109.383