Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g1227 ATGGCAGGAGAATTAGGAGTGCTTAACGCACTGGATGCGGCAAAAACACAATGGTACCACTTTACTGCAATTGTTATAGCAGGAATGGGATTCTTCACTGATGCCTATGACCTCTTCTGCATTTCCCTCGTCACAAAGCTTCTTGGAAGAGTATATTACACAGACATAACCAAAGACAAGCCAGGAGCACTCCCTCCAAACATCCAATCTGCCGTGACCGGCGTCGTACTCTGCGGCACGCTAGCCGGCCAACTATTCTTCGGTTGGTTGGGTGACAAACTGGGAAGAAAAAAGGTCTATGGCCTGACACTCATGCTCATGGTGGTTTGTTCGATTGCGTCTGGCCTTTCCTTCGGAAGCAGTCCTAACGGTGTCATGGCAACACTTTGTTTCTTCAGATTCTGGCTTGGTTTCGGTATTGGCGGCGATTATCCTCTCTCCGCCACAATCATGTCCGAATATGCTAACAAGAAGACAAGAGGAGCCTTCATCGCCGCGGTTTTCGCTATGCAAGGATTCGGAATCTTGGCGGGTGGAATTGTTGCCCTAATCGTTTCCACTTCATTTGATCACAAATACAAGGTTCCTAGCTATGAAGAAAATCGCGAAGCGTCTTTGGTGCTACCTGTATTTGACTATGTTTGGCGGATTATTTTGATGTTTGGTGCAGTTCCGGCCGCGCTAACATACTACTGGCGTATGAAGATGCCGGAAACTGCTCGTTACACGGCGCTTGTTGCGAAAAATGCTACGAAAGCCGCCGCGGACATGTCTAAGGTGTTGAATGTTGAGCTTGAATCTGAGGAGGAGAAGGTGCAGAAACTAGCAAATGCTGAGAACAACCGGTTCGGCTTGTTTAGCACTGAGTTCGCCAAGCGCCATGGTCTCCATTTGGTTGGAACAACGACCACTTGGTTCCTTCTAGATATTGCATTTTATAGCCAGAATCTTTTCCAGAAGGATATTTTTAGTGCTATTGGATGGATCCCACCTGCACAGGAGATGAATGCAATCCATGAGGTTTATAGAATTGCAAAAGCTCAAACTCTTATAGCACTCTGCAGTACTGTGCCAGGTAATGTTATGAAAAAGAAGAAAAAAAAACTACTCCAACAAAAATGTTAA 1125 0.4596 MAGELGVLNALDAAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRVYYTDITKDKPGALPPNIQSAVTGVVLCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSIASGLSFGSSPNGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSTSFDHKYKVPSYEENREASLVLPVFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNATKAAADMSKVLNVELESEEEKVQKLANAENNRFGLFSTEFAKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQEMNAIHEVYRIAKAQTLIALCSTVPGNVMKKKKKKLLQQKC* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g1227 374 SUPERFAMILY MFS general substrate transporter 11 328 IPR036259 -
Amo12g1227 374 Pfam Sugar (and other) transporter 24 295 IPR005828 GO:0016021|GO:0022857|GO:0055085
Amo12g1227 374 Coils Coil 258 282 - -
Amo12g1227 374 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 360 - -
Amo12g1227 374 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 374 IPR020846 GO:0022857
Amo12g1227 374 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 360 - -
Amo12g1227 374 CDD MFS_PhT 24 359 - -
Amo12g1227 374 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Amo12g1227 374 Gene3D MFS general substrate transporter like domains 272 363 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g1227 Amo-Chr12 40053188 40054312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g1227 1 359 Inorganic Solute Cotransporters AT3G54700 77.500 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g1227 K08176 - gmx:100780201 629.017